Best Alignments for T0399

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2g2uB	2.6369e-11	2g2uB/T0399-2g2uB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
1jtgB	2.9482e-11	1jtgB/T0399-1jtgB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
2o8xA	2.9584e+01	2o8xA/T0399-2o8xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oxgB	3.1013e+01	2oxgB/T0399-2oxgB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wdcB	3.1695e+01	1wdcB/T0399-1wdcB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
2h27A	3.2216e+01	2h27A/T0399-2h27A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.13.2
1u6eA	4.0794e+01	1u6eA/T0399-1u6eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
2qdrA	4.1230e+01	2qdrA/T0399-2qdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t6sA	4.1431e+01	1t6sA/T0399-1t6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.60 a.4.5.60
2fbhA	4.3893e+01	2fbhA/T0399-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.28
2grjA	5.0241e+01	2grjA/T0399-2grjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dliA	5.0999e+01	1dliA/T0399-1dliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.100.1.4 c.2.1.6 c.26.3.1
2h36X	5.5380e+01	2h36X/T0399-2h36X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vd6A	5.7207e+01	1vd6A/T0399-1vd6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.18.3
1fgjA	5.9390e+01	1fgjA/T0399-1fgjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z82A	6.1648e+01	1z82A/T0399-1z82A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vjfA	6.4665e+01	1vjfA/T0399-1vjfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.116.1.1
1rw1A	6.6556e+01	1rw1A/T0399-1rw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.12
2f6rA	6.6999e+01	2f6rA/T0399-2f6rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1j3wA	6.8449e+01	1j3wA/T0399-1j3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.7.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001