Best Alignments for T0399

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2g2uB	2.1305e-10	2g2uB/T0399-2g2uB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
1jtgB	2.3796e-10	1jtgB/T0399-1jtgB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
2h36X	1.1362e+01	2h36X/T0399-2h36X-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o8xA	2.4380e+01	2o8xA/T0399-2o8xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h27A	2.9719e+01	2h27A/T0399-2h27A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.13.2
1vd6A	4.2939e+01	1vd6A/T0399-1vd6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.18.3
1fgjA	4.9811e+01	1fgjA/T0399-1fgjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wdvA	5.1943e+01	1wdvA/T0399-1wdvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.116.1.1
1mp8A	5.8610e+01	1mp8A/T0399-1mp8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oxgB	5.9030e+01	2oxgB/T0399-2oxgB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b12A	5.9482e+01	1b12A/T0399-1b12A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bxkB	6.0569e+01	3bxkB/T0399-3bxkB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a0mA	6.2329e+01	2a0mA/T0399-2a0mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.42.1.1
2z0xA	6.3181e+01	2z0xA/T0399-2z0xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r01A	6.3663e+01	2r01A/T0399-2r01A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b71D	6.4205e+01	3b71D/T0399-3b71D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e12A	6.5091e+01	2e12A/T0399-2e12A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cfmA	6.5322e+01	2cfmA/T0399-2cfmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bddA	6.6158e+01	3bddA/T0399-3bddA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2agmA	6.8147e+01	2agmA/T0399-2agmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001