Best Alignments for T0399

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2choA	1.1648e+01	2choA/T0399-2choA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.246.1.1 c.1.8.10 d.92.2.3
1z1dA	1.2378e+01	1z1dA/T0399-1z1dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.16
1wmxA	1.5146e+01	1wmxA/T0399-1wmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.24
1n0qA	3.5025e+01	1n0qA/T0399-1n0qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	k.37.1.1
2rddB	3.8959e+01	2rddB/T0399-2rddB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dxqA	4.5244e+01	2dxqA/T0399-2dxqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ywyA	5.2530e+01	1ywyA/T0399-1ywyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.55.2.1
2f8yA	5.4686e+01	2f8yA/T0399-2f8yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bw8A	5.7207e+01	3bw8A/T0399-3bw8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fl4A	5.7678e+01	2fl4A/T0399-2fl4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1tx9A	6.0381e+01	1tx9A/T0399-1tx9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.84.1.1
2uubE	6.1324e+01	2uubE/T0399-2uubE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.14.1.1 d.50.1.2
1fe0A	6.1863e+01	1fe0A/T0399-1fe0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
2ge3A	6.3046e+01	2ge3A/T0399-2ge3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1tiqA	6.8506e+01	1tiqA/T0399-1tiqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1spvA	6.8741e+01	1spvA/T0399-1spvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.50.1.2
2g62A	7.6508e+01	2g62A/T0399-2g62A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.268.1.1
1kpgA	7.6704e+01	1kpgA/T0399-1kpgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.18
1f0nA	7.8789e+01	1f0nA/T0399-1f0nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.3
3bkxA	7.9064e+01	3bkxA/T0399-3bkxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001