# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1z1dA	103	6.277	a.4.5.16	124351
1wmxA	205	19.87	b.18.1.24	109418
2dxqA	150	20.19		
2choA	716	21.34	a.246.1.1,c.1.8.10,d.92.2.3	130479,130480,130481
1chkA	238	27.70	d.2.1.7	36999
1fe0A	68	28.47	d.58.17.1	39345
2fl4A	149	32.81	d.108.1.1	133706
3bw8A	217	35.46		
2g62A	325	39.94	a.268.1.1	134685
2ge3A	170	41.25	d.108.1.1	135044
1tx9A	151	42.24	a.84.1.1	119383
1cc8A	73	51.84	d.58.17.1	39343
1tiqA	180	53.38	d.108.1.1	107010
3bkxA	275	53.64		
1mk4A	157	54.36	d.108.1.1	84979
2b5gA	171	57.30	d.108.1.1	127892
1lshB	319	57.58	f.7.1.1	74245
1s3zA	165	57.76	d.108.1.1	105250
1znwA	207	57.98	c.37.1.1	125412
2rddB	37	58.23		
2fiaA	162	58.23	d.108.1.1	133514
1wq8A	110	59.97	g.17.1.1	114832
2euiA	153	62.86	d.108.1.1	132387
1on0A	158	63.27	d.108.1.1	87095
1yr0A	175	68.55	d.108.1.1	123905
2cntA	160	74.80		
1yvoA	172	76.39	d.108.1.1	124106
1ojqA	212	78.01	d.166.1.1	93146
1sqhA	312	79.02	d.108.1.5	98966
2oh1A	179	80.19		
2cy2A	174	81.86	d.108.1.1	131016
2hgcA	102	85.51		
1ywyA	74	87.06	b.55.2.1	124166
2q4vA	170	88.98	d.108.1.1	139878