# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2choA	716	2.755	a.246.1.1,c.1.8.10,d.92.2.3	130479,130480,130481
1wmxA	205	3.125	b.18.1.24	109418
1z1dA	103	7.779	a.4.5.16	124351
1n0qA	93	13.28	k.37.1.1	79754
2uubE	162	24.21	d.14.1.1,d.50.1.2	139936,139937
2dxqA	150	27.41		
2f8yA	223	28.20		
1kpgA	287	28.32	c.66.1.18	68735
1fe0A	68	31.02	d.58.17.1	39345
2fl4A	149	33.28	d.108.1.1	133706
1f0nA	285	34.93	c.69.1.3	34636
1pdgA	109	35.14	g.17.1.1	44748
2ge3A	170	46.12	d.108.1.1	135044
1tiqA	180	47.10	d.108.1.1	107010
1cc8A	73	47.82	d.58.17.1	39343
1tx9A	151	47.97	a.84.1.1	119383
1spvA	184	51.18	c.50.1.2	98957
2covD	104	51.36		
2fiaA	162	53.42	d.108.1.1	133514
2cy2A	174	57.59	d.108.1.1	131016
3bw8A	217	58.21		
1wq8A	110	58.42	g.17.1.1	114832
1fjgE	162	59.19	d.14.1.1,d.50.1.2	37553,38789
2rddB	37	61.41		
2d9zA	129	67.74		
1yvoA	172	67.82	d.108.1.1	124106
1ywyA	74	68.70	b.55.2.1	124166
1vr8A	142	70.42	d.312.1.1	120445
1mk4A	157	74.68	d.108.1.1	84979
1n4qB	377	75.43	a.102.4.3	91636
2fckA	181	77.46	d.108.1.1	133272
1yr0A	175	81.60	d.108.1.1	123905
1on0A	158	89.41	d.108.1.1	87095