This file specifies which residues will be varied Column 2: Chain Column 4-7: sequential residue number Column 9-12: pdb residue number Column 14-18: id (described below) Column 21-40: amino acids to be used NATAA => use native amino acid ALLAA => all amino acids NATRO => native amino acid and rotamer PIKAA => select inividual amino acids POLAR => polar amino acids APOLA => apolar amino acids The following demo lines are in the proper format A 1 3 NATAA A 2 4 ALLAA A 3 6 NATRO A 4 7 NATAA B 5 1 PIKAA DFLM B 6 2 PIKAA HIL B 7 3 POLAR ------------------------------------------------- start A 1 1 NATAA M A 2 2 NATAA S A 3 3 NATAA M A 4 4 NATAA K A 5 5 NATAA K A 6 6 NATAA T A 7 7 NATAA K A 8 8 NATAA N A 9 9 NATAA W A 10 10 NATAA L A 11 11 NATAA L A 12 12 NATAA V A 13 13 NATAA F A 14 14 NATAA L A 15 15 NATAA T A 16 16 NATAA V A 17 17 NATAA T A 18 18 NATAA F A 19 19 NATRO C A 20 20 NATAA F A 21 21 NATAA L A 22 22 NATAA M A 23 23 NATAA L A 24 24 NATAA G A 25 25 NATRO C A 26 26 NATAA Q A 27 27 NATAA S A 28 28 NATAA K A 29 29 NATAA E A 30 30 NATAA D A 31 31 NATAA K A 32 32 NATAA K A 33 33 NATAA G A 34 34 NATAA G A 35 35 NATAA T A 36 36 NATAA K A 37 37 NATRO P A 38 38 NATAA S A 39 39 NATAA N A 40 40 NATAA E A 41 41 NATAA A A 42 42 NATAA A A 43 43 NATAA L A 44 44 NATAA T A 45 45 NATAA K A 46 46 NATAA T A 47 47 NATAA E A 48 48 NATAA N A 49 49 NATAA L A 50 50 NATAA D A 51 51 NATAA F A 52 52 NATAA R A 53 53 NATAA L A 54 54 NATAA S A 55 55 NATAA F A 56 56 NATAA N A 57 57 NATAA K A 58 58 NATAA I A 59 59 NATAA K A 60 60 NATAA V A 61 61 NATAA T A 62 62 NATAA T A 63 63 NATAA D A 64 64 NATAA Q A 65 65 NATAA N A 66 66 NATAA H A 67 67 NATAA F A 68 68 NATAA S A 69 69 NATAA G