PFRMAT RR
TARGET T0399
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MSMKKTKNWLLVFLTVTFCFLMLGCQSKEDKKGGTKPSNEAALTKTENLD
FRLSFNKIKVTTDQNHFSG
4 13 0 8 0.53944
4 14 0 8 0.520769
4 15 0 8 0.479352
4 16 0 8 0.499216
5 14 0 8 0.586993
5 15 0 8 0.513462
5 16 0 8 0.561109
5 17 0 8 0.473305
5 18 0 8 0.532571
5 19 0 8 0.495332
5 20 0 8 0.484932
5 21 0 8 0.480473
5 22 0 8 0.485257
5 23 0 8 0.475285
5 53 0 8 0.493125
6 15 0 8 0.574242
6 16 0 8 0.640828
6 17 0 8 0.533825
6 18 0 8 0.614403
6 19 0 8 0.580588
6 20 0 8 0.565906
6 21 0 8 0.548727
6 22 0 8 0.543941
6 23 0 8 0.525688
6 25 0 8 0.517486
6 43 0 8 0.51439
6 51 0 8 0.467241
6 53 0 8 0.5155
6 55 0 8 0.469404
6 60 0 8 0.467324
7 16 0 8 0.713637
7 17 0 8 0.59374
7 18 0 8 0.63636
7 19 0 8 0.590635
7 20 0 8 0.574638
7 21 0 8 0.566934
7 22 0 8 0.576279
7 23 0 8 0.578121
7 24 0 8 0.496907
7 25 0 8 0.56277
7 27 0 8 0.485283
7 43 0 8 0.514738
7 45 0 8 0.466208
7 53 0 8 0.51526
7 55 0 8 0.500097
7 60 0 8 0.494949
8 17 0 8 0.631783
8 18 0 8 0.580032
8 19 0 8 0.504584
8 20 0 8 0.481542
8 21 0 8 0.480862
8 22 0 8 0.504448
8 23 0 8 0.516575
8 24 0 8 0.511257
8 25 0 8 0.543813
8 26 0 8 0.466431
8 27 0 8 0.519491
8 35 0 8 0.467942
8 36 0 8 0.499481
8 37 0 8 0.496642
8 45 0 8 0.474542
8 53 0 8 0.526693
8 54 0 8 0.521606
8 55 0 8 0.55542
8 56 0 8 0.481226
8 57 0 8 0.479265
8 60 0 8 0.57343
8 61 0 8 0.573277
8 62 0 8 0.576459
8 63 0 8 0.489872
9 18 0 8 0.794191
9 19 0 8 0.755669
9 20 0 8 0.744059
9 21 0 8 0.725747
9 22 0 8 0.717304
9 23 0 8 0.689234
9 24 0 8 0.571661
9 25 0 8 0.694153
9 26 0 8 0.531226
9 27 0 8 0.585967
9 28 0 8 0.46821
9 30 0 8 0.495881
9 35 0 8 0.514983
9 36 0 8 0.54524
9 37 0 8 0.545657
9 38 0 8 0.496943
9 39 0 8 0.475734
9 41 0 8 0.464575
9 42 0 8 0.515243
9 43 0 8 0.606932
9 45 0 8 0.521353
9 46 0 8 0.493533
9 49 0 8 0.512444
9 51 0 8 0.564155
9 52 0 8 0.532604
9 53 0 8 0.730163
9 54 0 8 0.648452
9 55 0 8 0.694784
9 56 0 8 0.561442
9 57 0 8 0.58495
9 58 0 8 0.689735
9 59 0 8 0.594043
9 60 0 8 0.778062
9 61 0 8 0.683771
9 62 0 8 0.650111
9 63 0 8 0.530274
10 19 0 8 0.878437
10 20 0 8 0.874451
10 21 0 8 0.856354
10 22 0 8 0.841378
10 23 0 8 0.801197
10 24 0 8 0.645508
10 25 0 8 0.799465
10 26 0 8 0.602128
10 27 0 8 0.646952
10 28 0 8 0.496821
10 30 0 8 0.548658
10 31 0 8 0.467894
10 35 0 8 0.563424
10 36 0 8 0.583009
10 37 0 8 0.569932
10 38 0 8 0.511531
10 39 0 8 0.493423
10 41 0 8 0.516447
10 42 0 8 0.594642
10 43 0 8 0.714757
10 45 0 8 0.55888
10 46 0 8 0.525132
10 49 0 8 0.595126
10 51 0 8 0.664562
10 52 0 8 0.616178
10 53 0 8 0.819974
10 54 0 8 0.706739
10 55 0 8 0.757645
10 56 0 8 0.598661
10 57 0 8 0.638111
10 58 0 8 0.787475
10 59 0 8 0.651548
10 60 0 8 0.840184
10 61 0 8 0.699238
10 62 0 8 0.641757
10 63 0 8 0.501049
11 20 0 8 0.90396
11 21 0 8 0.883108
11 22 0 8 0.864016
11 23 0 8 0.822068
11 24 0 8 0.626262
11 25 0 8 0.822744
11 26 0 8 0.605828
11 27 0 8 0.653069
11 28 0 8 0.486448
11 30 0 8 0.552212
11 35 0 8 0.56262
11 36 0 8 0.57817
11 37 0 8 0.564182
11 38 0 8 0.502837
11 39 0 8 0.492555
11 41 0 8 0.550032
11 42 0 8 0.634845
11 43 0 8 0.760158
11 45 0 8 0.538045
11 46 0 8 0.509686
11 49 0 8 0.655025
11 51 0 8 0.739669
11 52 0 8 0.677983
11 53 0 8 0.863133
11 54 0 8 0.730216
11 55 0 8 0.792916
11 56 0 8 0.619221
11 57 0 8 0.676917
11 58 0 8 0.838962
11 59 0 8 0.682991
11 60 0 8 0.865494
11 61 0 8 0.674096
11 62 0 8 0.600501
12 21 0 8 0.856793
12 22 0 8 0.82961
12 23 0 8 0.781313
12 24 0 8 0.561294
12 25 0 8 0.783091
12 26 0 8 0.560753
12 27 0 8 0.607926
12 30 0 8 0.515206
12 35 0 8 0.537165
12 36 0 8 0.552109
12 37 0 8 0.544925
12 38 0 8 0.493152
12 39 0 8 0.48935
12 41 0 8 0.552862
12 42 0 8 0.621942
12 43 0 8 0.737643
12 45 0 8 0.486572
12 46 0 8 0.469643
12 49 0 8 0.668706
12 51 0 8 0.755685
12 52 0 8 0.692488
12 53 0 8 0.848952
12 54 0 8 0.702028
12 55 0 8 0.768023
12 56 0 8 0.60589
12 57 0 8 0.671641
12 58 0 8 0.830335
12 59 0 8 0.66594
12 60 0 8 0.828846
12 61 0 8 0.592181
12 62 0 8 0.522636
13 22 0 8 0.817934
13 23 0 8 0.765633
13 24 0 8 0.512455
13 25 0 8 0.76445
13 26 0 8 0.520606
13 27 0 8 0.570893
13 30 0 8 0.488931
13 35 0 8 0.515721
13 36 0 8 0.526309
13 37 0 8 0.530325
13 38 0 8 0.482986
13 39 0 8 0.488012
13 40 0 8 0.465007
13 41 0 8 0.566606
13 42 0 8 0.629302
13 43 0 8 0.738645
13 49 0 8 0.699802
13 50 0 8 0.48093
13 51 0 8 0.78091
13 52 0 8 0.695906
13 53 0 8 0.841091
13 54 0 8 0.661146
13 55 0 8 0.751408
13 56 0 8 0.575263
13 57 0 8 0.65489
13 58 0 8 0.826817
13 59 0 8 0.617311
13 60 0 8 0.786357
13 61 0 8 0.467499
14 23 0 8 0.775711
14 24 0 8 0.530689
14 25 0 8 0.768504
14 26 0 8 0.528702
14 27 0 8 0.586351
14 30 0 8 0.514649
14 35 0 8 0.523885
14 36 0 8 0.533629
14 37 0 8 0.546424
14 38 0 8 0.501563
14 39 0 8 0.510059
14 40 0 8 0.488311
14 41 0 8 0.587544
14 42 0 8 0.642527
14 43 0 8 0.749931
14 45 0 8 0.464075
14 49 0 8 0.71235
14 50 0 8 0.496311
14 51 0 8 0.786881
14 52 0 8 0.683707
14 53 0 8 0.830497
14 54 0 8 0.637621
14 55 0 8 0.74158
14 56 0 8 0.570392
14 57 0 8 0.645589
14 58 0 8 0.815519
14 59 0 8 0.591841
14 60 0 8 0.765574
15 25 0 8 0.582526
15 27 0 8 0.505067
15 35 0 8 0.480187
15 36 0 8 0.4949
15 37 0 8 0.508916
15 38 0 8 0.474546
15 39 0 8 0.474687
15 41 0 8 0.503749
15 42 0 8 0.519212
15 43 0 8 0.564057
15 49 0 8 0.587414
15 51 0 8 0.653693
15 52 0 8 0.589189
15 53 0 8 0.681882
15 54 0 8 0.549624
15 55 0 8 0.60312
15 56 0 8 0.505565
15 57 0 8 0.565265
15 58 0 8 0.651332
15 59 0 8 0.498163
15 60 0 8 0.589493
16 25 0 8 0.711159
16 26 0 8 0.493672
16 27 0 8 0.559405
16 30 0 8 0.509273
16 35 0 8 0.502168
16 36 0 8 0.509743
16 37 0 8 0.534595
16 38 0 8 0.494391
16 39 0 8 0.501158
16 40 0 8 0.478387
16 41 0 8 0.561219
16 42 0 8 0.605094
16 43 0 8 0.69959
16 49 0 8 0.656355
16 51 0 8 0.725905
16 52 0 8 0.606754
16 53 0 8 0.762716
16 54 0 8 0.565381
16 55 0 8 0.671659
16 56 0 8 0.510334
16 57 0 8 0.575902
16 58 0 8 0.74038
16 59 0 8 0.515387
16 60 0 8 0.693827
17 27 0 8 0.512924
17 30 0 8 0.473471
17 35 0 8 0.480902
17 36 0 8 0.49109
17 37 0 8 0.511688
17 38 0 8 0.478191
17 39 0 8 0.479009
17 41 0 8 0.506582
17 42 0 8 0.529945
17 43 0 8 0.581694
17 49 0 8 0.562306
17 51 0 8 0.611689
17 52 0 8 0.532983
17 53 0 8 0.644141
17 54 0 8 0.508608
17 55 0 8 0.571023
17 57 0 8 0.512552
17 58 0 8 0.607043
17 60 0 8 0.573264
18 27 0 8 0.526487
18 30 0 8 0.486216
18 35 0 8 0.464915
18 37 0 8 0.49357
18 41 0 8 0.519215
18 42 0 8 0.572051
18 43 0 8 0.673398
18 49 0 8 0.602665
18 51 0 8 0.663389
18 52 0 8 0.525698
18 53 0 8 0.716816
18 54 0 8 0.499072
18 55 0 8 0.622602
18 57 0 8 0.494614
18 58 0 8 0.686739
18 60 0 8 0.654264
19 30 0 8 0.511892
19 35 0 8 0.470754
19 36 0 8 0.463656
19 37 0 8 0.499708
19 41 0 8 0.538451
19 42 0 8 0.605757
19 43 0 8 0.723196
19 49 0 8 0.630254
19 51 0 8 0.692335
19 52 0 8 0.526698
19 53 0 8 0.752216
19 54 0 8 0.499005
19 55 0 8 0.648668
19 57 0 8 0.485578
19 58 0 8 0.721828
19 60 0 8 0.686326
20 30 0 8 0.523917
20 35 0 8 0.470395
20 37 0 8 0.494218
20 41 0 8 0.54289
20 42 0 8 0.615519
20 43 0 8 0.743842
20 49 0 8 0.64407
20 51 0 8 0.711605
20 52 0 8 0.523691
20 53 0 8 0.772935
20 54 0 8 0.49289
20 55 0 8 0.664072
20 57 0 8 0.480677
20 58 0 8 0.739994
20 60 0 8 0.702934
21 30 0 8 0.54535
21 35 0 8 0.487413
21 36 0 8 0.474809
21 37 0 8 0.508073
21 41 0 8 0.552679
21 42 0 8 0.621683
21 43 0 8 0.748628
21 49 0 8 0.647848
21 51 0 8 0.713069
21 52 0 8 0.524082
21 53 0 8 0.770254
21 54 0 8 0.491911
21 55 0 8 0.662099
21 57 0 8 0.483309
21 58 0 8 0.730454
21 60 0 8 0.69716
22 31 0 8 0.490154
22 35 0 8 0.506536
22 36 0 8 0.496258
22 37 0 8 0.525654
22 38 0 8 0.467046
22 39 0 8 0.479565
22 41 0 8 0.566413
22 42 0 8 0.635995
22 43 0 8 0.754309
22 45 0 8 0.480494
22 46 0 8 0.466868
22 49 0 8 0.647346
22 51 0 8 0.704257
22 52 0 8 0.521447
22 53 0 8 0.756931
22 54 0 8 0.489725
22 55 0 8 0.652628
22 57 0 8 0.478129
22 58 0 8 0.714369
22 60 0 8 0.681313
23 34 0 8 0.46385
23 35 0 8 0.524694
23 36 0 8 0.519878
23 37 0 8 0.550724
23 38 0 8 0.49158
23 39 0 8 0.50257
23 40 0 8 0.485379
23 41 0 8 0.585033
23 42 0 8 0.649817
23 43 0 8 0.755334
23 45 0 8 0.512945
23 46 0 8 0.498984
23 49 0 8 0.650098
23 51 0 8 0.700528
23 52 0 8 0.519252
23 53 0 8 0.742299
23 54 0 8 0.488351
23 55 0 8 0.649153
23 57 0 8 0.48132
23 58 0 8 0.690745
23 60 0 8 0.672281
24 35 0 8 0.493724
24 36 0 8 0.501791
24 37 0 8 0.509633
24 38 0 8 0.469269
24 39 0 8 0.465593
24 41 0 8 0.483945
24 42 0 8 0.507921
24 43 0 8 0.548656
24 49 0 8 0.497204
24 51 0 8 0.515292
24 53 0 8 0.545015
24 55 0 8 0.494291
24 58 0 8 0.480307
24 60 0 8 0.472536
25 34 0 8 0.491685
25 35 0 8 0.564294
25 36 0 8 0.571971
25 37 0 8 0.585498
25 38 0 8 0.523639
25 39 0 8 0.526257
25 40 0 8 0.509017
25 41 0 8 0.60765
25 42 0 8 0.677891
25 43 0 8 0.768272
25 45 0 8 0.533549
25 46 0 8 0.514068
25 49 0 8 0.643281
25 51 0 8 0.69411
25 52 0 8 0.535238
25 53 0 8 0.746873
25 54 0 8 0.517562
25 55 0 8 0.653978
25 57 0 8 0.497644
25 58 0 8 0.695925
25 60 0 8 0.688172
26 35 0 8 0.538135
26 36 0 8 0.55405
26 37 0 8 0.55246
26 38 0 8 0.503416
26 39 0 8 0.493835
26 41 0 8 0.510915
26 42 0 8 0.540916
26 43 0 8 0.582376
26 45 0 8 0.47489
26 49 0 8 0.512328
26 51 0 8 0.534381
26 53 0 8 0.574393
26 54 0 8 0.465919
26 55 0 8 0.51758
26 58 0 8 0.50064
26 60 0 8 0.503702
27 36 0 8 0.513877
27 37 0 8 0.518999
27 38 0 8 0.467361
27 41 0 8 0.468715
27 42 0 8 0.492716
27 43 0 8 0.529652
27 49 0 8 0.469749
27 51 0 8 0.499553
27 53 0 8 0.537597
27 55 0 8 0.486293
27 58 0 8 0.464456
27 60 0 8 0.47122
28 37 0 8 0.476173
28 43 0 8 0.497008
28 51 0 8 0.469382
28 53 0 8 0.503608
30 43 0 8 0.48968
30 53 0 8 0.502886
31 41 0 8 0.506381
31 42 0 8 0.53698
31 43 0 8 0.574241
31 49 0 8 0.488195
31 51 0 8 0.508657
31 53 0 8 0.550733
31 55 0 8 0.505711
31 58 0 8 0.464805
31 60 0 8 0.484152
34 43 0 8 0.491633
34 53 0 8 0.502613
34 55 0 8 0.470197
35 45 0 8 0.508058
35 46 0 8 0.470503
35 49 0 8 0.513822
35 51 0 8 0.539172
35 52 0 8 0.500631
35 53 0 8 0.601594
35 54 0 8 0.517483
35 55 0 8 0.539273
35 57 0 8 0.489032
35 58 0 8 0.518755
35 60 0 8 0.539878
36 45 0 8 0.484801
36 49 0 8 0.495162
36 51 0 8 0.522772
36 52 0 8 0.490133
36 53 0 8 0.579386
36 54 0 8 0.503555
36 55 0 8 0.519789
36 57 0 8 0.47832
36 58 0 8 0.501387
36 60 0 8 0.520077
37 49 0 8 0.497881
37 51 0 8 0.535295
37 52 0 8 0.484738
37 53 0 8 0.579431
37 54 0 8 0.487008
37 55 0 8 0.522496
37 57 0 8 0.47364
37 58 0 8 0.519988
37 60 0 8 0.524493
38 51 0 8 0.474
38 53 0 8 0.515797
38 55 0 8 0.48068
38 60 0 8 0.470163
39 49 0 8 0.479785
39 51 0 8 0.505491
39 53 0 8 0.547978
39 54 0 8 0.469991
39 55 0 8 0.512312
39 58 0 8 0.484429
39 60 0 8 0.503485
40 49 0 8 0.531794
40 51 0 8 0.55588
40 52 0 8 0.501149
40 53 0 8 0.60803
40 54 0 8 0.524342
40 55 0 8 0.566384
40 57 0 8 0.497793
40 58 0 8 0.532651
40 60 0 8 0.56384
40 61 0 8 0.488717
40 62 0 8 0.491377
41 51 0 8 0.651931
41 52 0 8 0.588371
41 53 0 8 0.71717
41 54 0 8 0.608963
41 55 0 8 0.649873
41 56 0 8 0.521863
41 57 0 8 0.56453
41 58 0 8 0.63721
41 59 0 8 0.539326
41 60 0 8 0.671165
41 61 0 8 0.564295
41 62 0 8 0.554636
41 63 0 8 0.473546
41 66 0 8 0.481691
42 51 0 8 0.748676
42 52 0 8 0.688407
42 53 0 8 0.816091
42 54 0 8 0.695832
42 55 0 8 0.72918
42 56 0 8 0.580436
42 57 0 8 0.635653
42 58 0 8 0.741266
42 59 0 8 0.62986
42 60 0 8 0.768302
42 61 0 8 0.625749
42 62 0 8 0.596406
42 63 0 8 0.505205
42 64 0 8 0.480483
42 66 0 8 0.538964
43 52 0 8 0.767904
43 53 0 8 0.909648
43 54 0 8 0.750029
43 55 0 8 0.838334
43 56 0 8 0.616993
43 57 0 8 0.694653
43 58 0 8 0.859173
43 59 0 8 0.679777
43 60 0 8 0.869401
43 61 0 8 0.627151
43 62 0 8 0.606893
43 63 0 8 0.494529
43 64 0 8 0.494228
43 66 0 8 0.578825
44 53 0 8 0.789114
44 54 0 8 0.659573
44 55 0 8 0.708901
44 56 0 8 0.57132
44 57 0 8 0.620976
44 58 0 8 0.686562
44 59 0 8 0.568648
44 60 0 8 0.694431
44 61 0 8 0.548803
44 62 0 8 0.549188
44 66 0 8 0.484978
45 54 0 8 0.625784
45 55 0 8 0.679265
45 56 0 8 0.545254
45 57 0 8 0.59362
45 58 0 8 0.666904
45 59 0 8 0.541183
45 60 0 8 0.67137
45 61 0 8 0.532962
45 62 0 8 0.534099
45 66 0 8 0.467409
46 55 0 8 0.651317
46 56 0 8 0.517534
46 57 0 8 0.56616
46 58 0 8 0.633533
46 59 0 8 0.503017
46 60 0 8 0.63273
46 61 0 8 0.5009
46 62 0 8 0.506452
47 56 0 8 0.517263
47 57 0 8 0.540379
47 58 0 8 0.552147
47 59 0 8 0.468334
47 60 0 8 0.580477
47 61 0 8 0.523608
47 62 0 8 0.53739
48 57 0 8 0.60164
48 58 0 8 0.608169
48 59 0 8 0.569726
48 60 0 8 0.671495
48 61 0 8 0.645851
48 62 0 8 0.630161
48 63 0 8 0.533328
49 58 0 8 0.845047
49 59 0 8 0.721102
49 60 0 8 0.874303
49 61 0 8 0.744934
49 62 0 8 0.715514
49 63 0 8 0.600434
49 64 0 8 0.526484
49 66 0 8 0.55788
50 59 0 8 0.740175
50 60 0 8 0.81432
50 61 0 8 0.785809
50 62 0 8 0.752216
50 63 0 8 0.649165
50 64 0 8 0.53825
50 66 0 8 0.501565
51 60 0 8 0.94623
51 61 0 8 0.850119
51 62 0 8 0.809488
51 63 0 8 0.687661
51 64 0 8 0.588683
51 66 0 8 0.601021
52 61 0 8 0.859686
52 62 0 8 0.8043
52 63 0 8 0.693303
52 64 0 8 0.589411
52 65 0 8 0.477834
52 66 0 8 0.59256
53 62 0 8 0.783877
53 63 0 8 0.640696
53 64 0 8 0.579202
53 65 0 8 0.480484
53 66 0 8 0.638382
54 63 0 8 0.591449
54 64 0 8 0.528067
54 66 0 8 0.554694
55 64 0 8 0.564724
55 65 0 8 0.476913
55 66 0 8 0.609848
56 66 0 8 0.529716
57 66 0 8 0.544392
END