Best Alignments for T0398

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1li4A	5.9482e-07	1li4A/T0398-1li4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.3
1pjcA	1.5037e-06	1pjcA/T0398-1pjcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.2
1v8bA	6.6317e-06	1v8bA/T0398-1v8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.3
1mx3A	3.8756e-05	1mx3A/T0398-1mx3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.1
1l7dA	5.7043e-05	1l7dA/T0398-1l7dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.2
2vhxA	6.4080e-05	2vhxA/T0398-2vhxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x13A	6.8538e-05	1x13A/T0398-1x13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nacA	8.4457e-05	2nacA/T0398-2nacA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.1
1a4iA	9.4495e-05	1a4iA/T0398-1a4iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.7 c.58.1.2
2dbqA	1.0753e-04	2dbqA/T0398-2dbqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cukA	1.7490e-04	2cukA/T0398-2cukA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wwkA	1.9460e-04	1wwkA/T0398-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j6iA	2.0113e-04	2j6iA/T0398-2j6iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gpjA	2.3528e-04	1gpjA/T0398-1gpjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.151.1.1 c.2.1.7 d.58.39.1
2gcgA	2.4082e-04	2gcgA/T0398-2gcgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d0iA	2.7068e-04	2d0iA/T0398-2d0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b0aA	2.9804e-04	1b0aA/T0398-1b0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.7 c.58.1.2
1qp8A	3.1656e-04	1qp8A/T0398-1qp8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.1
1gdhA	3.5156e-04	1gdhA/T0398-1gdhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.1
2fssA	4.2403e-04	2fssA/T0398-2fssA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001