PFRMAT SS
TARGET T0398
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0398.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 789
METHOD
MODEL 1
M C 0.426
L C 0.322
T C 0.336
G E 0.372
K E 0.689
H E 0.857
V E 0.833
V E 0.758
I C 0.473
I H 0.626
G H 0.836
G H 0.926
D H 0.984
A H 0.983
R H 0.983
Q H 0.980
L H 0.957
E H 0.868
I H 0.515
I T 0.458
R C 0.472
K E 0.323
L E 0.678
S E 0.853
T E 0.805
F E 0.504
D T 0.223
A H 0.302
K H 0.468
I H 0.441
S H 0.516
L H 0.374
V E 0.260
G T 0.276
F C 0.554
D C 0.739
Q H 0.711
L H 0.847
D H 0.919
D H 0.914
G H 0.865
F H 0.778
I H 0.512
G T 0.698
V C 0.366
T E 0.445
K E 0.410
M C 0.360
R C 0.350
I H 0.354
D H 0.742
E H 0.798
V H 0.818
D H 0.793
W H 0.714
N H 0.549
T H 0.346
V C 0.400
D C 0.345
A E 0.650
I E 0.851
L E 0.864
L E 0.774
P C 0.495
I C 0.633
S C 0.688
G C 0.806
T C 0.757
N C 0.292
E H 0.268
A H 0.337
G H 0.412
K H 0.511
V H 0.577
D H 0.570
T H 0.580
I H 0.556
F H 0.510
S H 0.424
N H 0.377
E H 0.408
S H 0.458
I H 0.534
V H 0.567
L H 0.558
T H 0.633
E H 0.711
E H 0.644
M H 0.572
I H 0.421
E T 0.465
K C 0.355
T C 0.404
P C 0.322
N C 0.301
H C 0.307
C E 0.488
V E 0.628
V E 0.738
Y E 0.767
S E 0.684
G E 0.532
I E 0.454
S E 0.353
N C 0.356
T H 0.435
Y H 0.512
L H 0.564
N H 0.615
Q H 0.655
C H 0.734
M H 0.810
K H 0.857
K H 0.875
T H 0.886
N H 0.869
R H 0.821
T H 0.784
L H 0.770
V H 0.766
K H 0.724
L H 0.726
M H 0.668
E H 0.597
R H 0.719
D H 0.750
D H 0.775
I H 0.813
A H 0.812
I H 0.840
Y H 0.841
N H 0.802
S H 0.764
I H 0.817
P H 0.857
T H 0.869
A H 0.890
E H 0.869
G H 0.858
T H 0.839
I H 0.796
M H 0.702
M H 0.617
A H 0.509
I H 0.332
Q T 0.390
H C 0.265
T C 0.301
D C 0.351
F E 0.536
T E 0.631
I E 0.519
H T 0.741
G T 0.758
A C 0.509
N E 0.783
V E 0.983
A E 0.994
V E 0.995
L E 0.976
G E 0.663
L C 0.378
G S 0.424
R H 0.965
V H 0.988
G H 0.994
M H 0.996
S H 0.997
V H 0.997
A H 0.997
R H 0.995
K H 0.994
F H 0.993
A H 0.980
A H 0.841
L T 0.772
G T 0.956
A C 0.927
K E 0.612
V E 0.957
K E 0.991
V E 0.986
G E 0.902
A E 0.420
R C 0.621
E C 0.782
S H 0.447
D H 0.601
L H 0.723
L H 0.901
A H 0.903
R H 0.938
I H 0.948
A H 0.946
E H 0.870
M H 0.491
G T 0.718
M C 0.721
E C 0.542
P C 0.333
F C 0.363
H C 0.392
I C 0.318
S H 0.319
K H 0.362
A C 0.318
A H 0.267
Q T 0.251
E E 0.270
L E 0.571
R E 0.761
D E 0.941
V E 0.930
D E 0.923
V E 0.752
C E 0.510
I C 0.502
N C 0.404
T S 0.504
I S 0.484
P C 0.551
A T 0.331
L T 0.332
V C 0.230
V C 0.390
T C 0.783
A H 0.968
N H 0.969
V H 0.950
L H 0.919
A H 0.698
E T 0.551
M C 0.459
P C 0.765
S T 0.649
H T 0.640
T E 0.880
F E 0.996
V E 0.998
I E 0.994
D E 0.968
L E 0.707
A C 0.388
S S 0.418
K C 0.527
P T 0.271
G C 0.254
G C 0.323
T C 0.482
D C 0.441
F H 0.916
R H 0.943
Y H 0.949
A H 0.960
E H 0.918
K H 0.793
R T 0.542
G T 0.757
I C 0.556
K C 0.372
A E 0.633
L E 0.652
L E 0.556
V C 0.477
P T 0.477
G T 0.462
L C 0.570
P C 0.539
G E 0.310
I E 0.376
V E 0.387
A C 0.466
P C 0.466
K H 0.256
T H 0.383
A H 0.626
G H 0.821
R H 0.879
I H 0.901
L H 0.886
A H 0.818
D H 0.739
V H 0.684
L H 0.572
V H 0.522
K H 0.554
L H 0.572
L H 0.465
A H 0.267
E C 0.459
P C 0.910
S C 0.998
END