Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2evbA	7.3306e-01	2evbA/T0397-2evbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y8oB	2.0647e+00	1y8oB/T0397-1y8oB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1zkoA	2.9257e+00	1zkoA/T0397-1zkoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hpcA	4.1085e+00	1hpcA/T0397-1hpcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1bdo	8.6877e+00	1bdo/T0397-1bdo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bdoA	8.8554e+00	1bdoA/T0397-1bdoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
3cdxA	1.3788e+01	3cdxA/T0397-3cdxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qf7A	1.8934e+01	2qf7A/T0397-2qf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qj8A	2.1238e+01	2qj8A/T0397-2qj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tc1A	2.3342e+01	1tc1A/T0397-1tc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.61.1.1
2ajrA	2.3650e+01	2ajrA/T0397-2ajrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.72.1.1
1qksA	2.4427e+01	1qksA/T0397-1qksA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.2 b.70.2.1
2q4zA	2.4454e+01	2q4zA/T0397-2q4zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ihoA	2.9073e+01	2ihoA/T0397-2ihoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2odiA	3.1886e+01	2odiA/T0397-2odiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e63A	3.6475e+01	2e63A/T0397-2e63A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2brxA	4.1229e+01	2brxA/T0397-2brxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.73.1.3
1vqoA	4.1813e+01	1vqoA/T0397-1vqoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.5.3 b.40.4.5
2hqqA	4.3241e+01	2hqqA/T0397-2hqqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mwwA	4.8550e+01	1mwwA/T0397-1mwwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001