Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1gjxA	1.4484e-01	1gjxA/T0397-1gjxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1bdoA	1.6851e-01	1bdoA/T0397-1bdoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
2evbA	1.8245e-01	2evbA/T0397-2evbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cdxA	2.0356e-01	3cdxA/T0397-3cdxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ghj	2.2989e-01	1ghj/T0397-1ghj-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qjoA	2.4084e-01	1qjoA/T0397-1qjoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1y8oB	2.4640e-01	1y8oB/T0397-1y8oB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1zkoA	3.8585e-01	1zkoA/T0397-1zkoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1htp	3.9036e-01	1htp/T0397-1htp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k8mA	5.3494e-01	1k8mA/T0397-1k8mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1bdo	6.5055e-01	1bdo/T0397-1bdo-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qj8A	9.0867e-01	2qj8A/T0397-2qj8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hpcA	1.1092e+00	1hpcA/T0397-1hpcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1ge8A	1.6238e+01	1ge8A/T0397-1ge8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.131.1.2 d.131.1.2
2aukA	2.0164e+01	2aukA/T0397-2aukA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pfzA	2.2628e+01	1pfzA/T0397-1pfzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.50.1.2
1mc0A	2.3860e+01	1mc0A/T0397-1mc0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.1 d.110.2.1
1at0	2.5920e+01	1at0/T0397-1at0-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iz5A	3.2975e+01	1iz5A/T0397-1iz5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.131.1.2 d.131.1.2
1wgwA	3.4523e+01	1wgwA/T0397-1wgwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.24.13.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001