# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2evbA	74	1.885		
1zkoA	136	2.563		
1y8oB	128	3.271	b.84.1.1	122759
1hpcA	131	4.202	b.84.1.1	28221
2brxA	244	8.700	c.73.1.3	129028
2qj8A	332	9.347		
1qksA	567	20.30	a.3.1.2,b.70.2.1	15951,27710
3cdxA	354	20.54		
2qhpA	296	33.95		
1ofzA	312	38.63	b.68.8.1	86978
2ajrA	331	42.69	c.72.1.1	126892
1v84A	253	50.62	c.68.1.7	108419
2fmpA	335	51.87	a.60.6.1,a.60.12.1,d.218.1.2	133786,133787,133788
1bdoA	80	52.73	b.84.1.1	28214
2fv7A	331	54.43	c.72.1.1	134197
2ihoA	293	56.83		
1jxhA	288	56.91	c.72.1.2	67415
2f02A	323	57.97	c.72.1.1	132649
1zxfA	155	61.04	d.129.3.5	125771
1v8bA	479	61.63	c.2.1.4,c.23.12.3	113564,113565
1d3bB	91	66.93	b.38.1.1	24804
2nwhA	317	67.50		
2p1gA	249	68.35		
2dcnA	311	70.01	c.72.1.1	131374
1bdo	80	75.84		
1tc1A	220	76.70	c.61.1.1	34083
2v78A	313	77.69		
2hp1A	432	78.55