Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2dduA	2.0383e+01	2dduA/T0397-2dduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ztxE	2.3939e+01	1ztxE/T0397-1ztxE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.4
1ei5A	2.4402e+01	1ei5A/T0397-1ei5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.61.3.1 b.61.3.1 e.3.1.1
1b9dA	2.8746e+01	1b9dA/T0397-1b9dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.3.2
1yrkA	3.0818e+01	1yrkA/T0397-1yrkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ns2A	4.1386e+01	2ns2A/T0397-2ns2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bjoA	5.9306e+01	3bjoA/T0397-3bjoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c3jA	5.9311e+01	3c3jA/T0397-3c3jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r6xA	5.9890e+01	1r6xA/T0397-1r6xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.3 c.26.1.5
2df8A	6.3782e+01	2df8A/T0397-2df8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tffA	6.5011e+01	1tffA/T0397-1tffA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bo5A	6.6325e+01	3bo5A/T0397-3bo5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cb0A	6.6375e+01	2cb0A/T0397-2cb0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pywA	6.9404e+01	2pywA/T0397-2pywA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1moq	7.0200e+01	1moq/T0397-1moq-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e5fA	7.0312e+01	2e5fA/T0397-2e5fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hbtA	7.1265e+01	2hbtA/T0397-2hbtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zx0A	7.3960e+01	1zx0A/T0397-1zx0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b5iB	7.5817e+01	2b5iB/T0397-2b5iB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1itg	7.6347e+01	1itg/T0397-1itg-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001