(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0397
              10              20        30        40        50        6
              |               |         |         |         |         
   1 MKIPKIYVEG.ELNDGDRVA.....IEKDGNAIIFLEKDEEYSGNGKLLYQVIYDDLAKYMSLDT
   2 MKIPKIYVEG.ELNDGDRVA.....IEKDGNAIIFLEENEEYSGNGKLLYRVIYDDLAKYLSLDE
   3 MKIPKIYVEG.ELNDGDRVA.....IEKDGNAIIFLEKDEEYSGNGKLLYQVIYDDLAKYMSLDT
   4 MKIPKIYVEG.ELNDGDRVA.....IEKDGNAIIFLEENEEYSGNGKLLYQVIYDDLAKYLSLDK
   5 MKIPKIYVEG.ELNDGERVA.....IENNGKIIIFLEENEEYSGNGKLLYTVIYDDLVKYLSLNK
   6 MKIPKIYIEG.ELNDNNKVV.....IENEGKKIIFLEKEDEYFGDGKVLYQVIYDDLSKYLVLNK
   7 MKIPKLYVEN.NIFEDNEPCekiavSEKEIIFLDSDEVVDNYKNTHKILYKVRYDDIRSYIDNDV
   8 MRIPRLYVENaEKHEGRKVV.....IENGGKVIKFLDKDEEYEGDGKVLYQVIYDDFDNYVLMGT


      0        70          80  
     |         |           |  
   1 LKKDVLIQYPDKHT..LTYLKAGTK
   2 LKKDVLIQYPDKHT..FTYLKAGTK
   3 LKKDVLIQYPDKHT..FTYLKAGTK
   4 LKKDVLIQYPDKHT..FTYLKAGIK
   5 LKKDVLIQYPDKHT..VTYLKTGTE
   6 LKKDIFIKFPDNRT..FSYIKKGTE
   7 LKKDIFVKYPGNHT..FTHIKAGT-
   8 VTKDMIIEYEVGGVrqITYIKKGTK