# List of top-scoring protein chains for t2k-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1b79A	119	17.09	a.81.1.1	18451
1b9dA	163	20.96	c.55.3.2	33649
1t8tA	271	23.44	c.37.1.5	106685
2fiyA	309	33.91	e.59.1.1	133540
2ns2A	242	35.98		
1jweA	114	38.96	a.81.1.1	18455
2hkjA	469	39.84	a.156.1.3,d.14.1.3,d.122.1.2	136553,136554,136555
2dduA	387	43.85		
1wlyA	333	45.12		
3pcgA	200	45.20	b.3.6.1	22647
1bl3A	160	49.10	c.55.3.2	33655
1exqA	154	60.08	c.55.3.2	33646
2ra2A	64	68.94		
2bx9A	53	73.37		
2czlA	272	74.85	c.94.1.1	131055
1ei5A	520	75.65	b.61.3.1,b.61.3.1,e.3.1.1	27418,27419,42772
1ztxE	108	77.30	b.1.18.4	125658
2q8zA	342	82.10		
3bfxA	296	84.26		
3pchA	200	85.95	b.3.6.1	22653
2z67A	456	87.95