# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1t8tA	271	11.72	c.37.1.5	106685
1ztxE	108	17.50	b.1.18.4	125658
2hjgA	436	26.57		
1uc8A	280	27.01	c.30.1.6,d.142.1.7	99165,99166
2dduA	387	29.15		
2fiyA	309	33.35	e.59.1.1	133540
2gpzA	111	35.67		
1g3gA	164	37.40	b.26.1.2	23918
2dbnA	461	38.41		
2h62C	129	39.46	g.7.1.3	136179
2b3gA	123	45.80	b.40.4.3	127786
1v4sA	455	46.68	c.55.1.3,c.55.1.3	100309,100310
1rewC	135	58.39	g.7.1.3	97336
2elaA	175	70.06		
2dx0A	138	75.58		
2oxoA	103	78.73		
2gujA	155	80.22		
2qv8A	159	81.80		
1cfrA	285	87.16	c.52.1.7	33312