Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2odiA	1.9514e+00	2odiA/T0397-2odiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v47A	5.8096e+00	1v47A/T0397-1v47A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.3 c.26.1.5
1dgwX	3.2510e+01	1dgwX/T0397-1dgwX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.1.2
1i52A	3.3946e+01	1i52A/T0397-1i52A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.13
2q7nA	3.4963e+01	2q7nA/T0397-2q7nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q98A	3.5729e+01	1q98A/T0397-1q98A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.10
2cx4A	4.8949e+01	2cx4A/T0397-2cx4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.10
1fxoA	6.6643e+01	1fxoA/T0397-1fxoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.6
1h5rA	7.0188e+01	1h5rA/T0397-1h5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.6
1wy2A	7.0623e+01	1wy2A/T0397-1wy2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xm3A	7.0663e+01	1xm3A/T0397-1xm3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.31.1
2bskB	7.1929e+01	2bskB/T0397-2bskB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.83.1.1
2v94A	7.2861e+01	2v94A/T0397-2v94A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ywiA	7.4524e+01	2ywiA/T0397-2ywiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h7eA	7.5423e+01	1h7eA/T0397-1h7eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.13
1jykA	7.5810e+01	1jykA/T0397-1jykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.13
1jyoA	7.7454e+01	1jyoA/T0397-1jyoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.198.1.1
1lvwA	7.9256e+01	1lvwA/T0397-1lvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.6
2geyA	8.1664e+01	2geyA/T0397-2geyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oaaA	8.6928e+01	2oaaA/T0397-2oaaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001