# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1zxfA	155	15.42	d.129.3.5	125771
1v47A	349	16.04	b.122.1.3,c.26.1.5	100292,100293
2odiA	238	19.86		
2ywiA	196	20.63		
2bskB	90	22.80	g.83.1.1	129091
1wh2A	78	35.24	d.76.1.1	114630
1e0tA	470	39.58	b.58.1.1,c.1.12.1,c.49.1.1	27064,29292,33146
2yqcA	486	39.73		
1lvwA	295	41.85	c.68.1.6	84723
1lmeA	176	41.89	d.167.1.1	84629
2yzhA	171	42.33		
2v94A	107	42.97		
3cpnA	330	46.46		
1qcsA	211	47.49	b.52.2.3,d.31.1.1	26927,38461
1jc4A	148	49.09	d.32.1.4	62863
1tocR	120	52.02	g.8.1.2,g.8.1.2	44558,44559
2q0oA	236	55.72		
1vj1A	363	65.48	b.35.1.2,c.2.1.1	100794,100795
1xuvA	178	66.55	d.129.3.5	116069
2oxoA	103	75.74		
1ys5A	164	77.83	f.4.1.3	123956
3b4sA	94	78.12		
1wx0A	223	83.38	c.1.10.1	121382
2pgcA	207	86.56		
1h5rA	293	86.63	c.68.1.6	65623
1h7eA	245	88.02	c.68.1.13	60717
2jo6A	113	89.67