Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1v47A	7.0663e+00	1v47A/T0397-1v47A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.3 c.26.1.5
2odiA	8.4168e+00	2odiA/T0397-2odiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dgwX	3.9726e+01	1dgwX/T0397-1dgwX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.1.2
2dyqA	5.3796e+01	2dyqA/T0397-2dyqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ywxA	6.1173e+01	1ywxA/T0397-1ywxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.12.1.3
1cnvA	6.1494e+01	1cnvA/T0397-1cnvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.8.5
1xn9A	6.9982e+01	1xn9A/T0397-1xn9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.12.1.3
1xuvA	7.0756e+01	1xuvA/T0397-1xuvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.129.3.5
2inpA	7.3347e+01	2inpA/T0397-2inpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1el6A	7.5294e+01	1el6A/T0397-1el6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.182.1.1
2okcA	7.6242e+01	2okcA/T0397-2okcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3tdtA	7.7334e+01	3tdtA/T0397-3tdtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.81.1.2
1ji7A	7.9984e+01	1ji7A/T0397-1ji7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qg3A	8.0592e+01	1qg3A/T0397-1qg3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
2v94A	8.1718e+01	2v94A/T0397-2v94A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qqzA	8.2754e+01	2qqzA/T0397-2qqzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jj2U	8.4043e+01	1jj2U/T0397-1jj2U-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ej5A	8.5668e+01	1ej5A/T0397-1ej5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qwiA	8.6840e+01	1qwiA/T0397-1qwiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.227.1.1
1l6wA	8.6921e+01	1l6wA/T0397-1l6wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001