Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1bdoA	2.7502e-01	1bdoA/T0397-1bdoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1ghj	3.3012e-01	1ghj/T0397-1ghj-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qjoA	4.0469e-01	1qjoA/T0397-1qjoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
2evbA	5.1776e-01	2evbA/T0397-2evbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gjxA	6.1964e-01	1gjxA/T0397-1gjxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
3cdxA	6.2507e-01	3cdxA/T0397-3cdxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1htp	7.5783e-01	1htp/T0397-1htp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y8oB	8.5330e-01	1y8oB/T0397-1y8oB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1k8mA	9.2899e-01	1k8mA/T0397-1k8mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1bdo	1.1245e+00	1bdo/T0397-1bdo-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3crkC	1.2762e+00	3crkC/T0397-3crkC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hpcA	2.5246e+00	1hpcA/T0397-1hpcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
2qj8A	3.1968e+00	2qj8A/T0397-2qj8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zkoA	3.6487e+00	1zkoA/T0397-1zkoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d1uA	1.4260e+01	2d1uA/T0397-2d1uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pfzA	2.7002e+01	1pfzA/T0397-1pfzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.50.1.2
1t5eA	3.7699e+01	1t5eA/T0397-1t5eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.46.1.1
1vf7A	4.1186e+01	1vf7A/T0397-1vf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.46.1.1
2j58A	4.7904e+01	2j58A/T0397-2j58A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hc8A	5.4093e+01	2hc8A/T0397-2hc8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001