# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3cdxA	354	0.8294		
1ghj	79	2.110		
1qjoA	80	2.602	b.84.1.1	28229
1gjxA	81	2.926	b.84.1.1	65222
1k8mA	93	3.746	b.84.1.1	68314
1y8oB	128	3.874	b.84.1.1	122759
1bdoA	80	4.266	b.84.1.1	28214
3crkC	87	6.665		
1pfzA	380	7.853	b.50.1.2	26881
1htp	131	9.98		
2qj8A	332	12.62		
2d1uA	104	19.37		
1bdo	80	19.89		
2evbA	74	20.51		
1jer	138	30.47		
1hpcA	131	37.74	b.84.1.1	28221
2inuA	410	52.79		
2j58A	359	58.11		
2vchA	480	59.88		
2biwA	490	65.76		
3boeA	210	71.00		
1zkoA	136	75.66		
2jmvA	95	77.58