Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2evbA	1.4904e-01	2evbA/T0397-2evbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3crkC	6.3916e-01	3crkC/T0397-3crkC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y8oB	9.2873e-01	1y8oB/T0397-1y8oB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1bdo	3.3150e+00	1bdo/T0397-1bdo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hpcA	3.8103e+00	1hpcA/T0397-1hpcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1bdoA	4.1310e+00	1bdoA/T0397-1bdoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1zkoA	4.3910e+00	1zkoA/T0397-1zkoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cdxA	5.6112e+00	3cdxA/T0397-3cdxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pmi	1.9068e+01	1pmi/T0397-1pmi-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oziA	2.2840e+01	2oziA/T0397-2oziA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q4zA	2.2883e+01	2q4zA/T0397-2q4zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vf7A	2.5269e+01	1vf7A/T0397-1vf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.46.1.1
2qj8A	3.3495e+01	2qj8A/T0397-2qj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j58A	3.4462e+01	2j58A/T0397-2j58A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kkhA	4.6227e+01	1kkhA/T0397-1kkhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.14.1.5 d.58.26.3
1am2A	4.8259e+01	1am2A/T0397-1am2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2
2gu2A	4.8274e+01	2gu2A/T0397-2gu2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b24A	4.9873e+01	1b24A/T0397-1b24A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.95.2.1 d.95.2.1
1tc1A	5.8164e+01	1tc1A/T0397-1tc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.61.1.1
2qf7A	5.8450e+01	2qf7A/T0397-2qf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001