# List of top-scoring protein chains for t06-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2evbA	74	0.7596		
3crkC	87	1.438		
1y8oB	128	2.124	b.84.1.1	122759
1hpcA	131	7.517	b.84.1.1	28221
1pmi	440	10.48		
2j58A	359	13.14		
1zkoA	136	14.66		
1bdo	80	23.18		
2gu2A	312	23.69		
1bdoA	80	27.29	b.84.1.1	28214
2oziA	98	31.69		
3cdxA	354	39.33		
2g6yA	217	42.13		
2q4zA	312	45.08		
2coiA	386	45.35		
1b24A	188	47.73	d.95.2.1,d.95.2.1	40573,40574
1am2A	199	48.63	b.86.1.2	28381
1kkhA	317	48.76	d.14.1.5,d.58.26.3	72645,72646
2qj8A	332	58.38		
1vf7A	369	60.36	f.46.1.1	108557
2bcoA	350	71.88	c.56.5.7	128302
2d59A	144	72.63	c.2.1.8	131266
3cxjA	165	79.08		
3boxA	415	80.93		
2r37A	207	82.03		
2e63A	170	83.80		
1dqpA	230	84.48	c.61.1.1	34069
2vduB	450	85.19		
1d3bA	75	85.70	b.38.1.1	24798
2h7wA	131	88.37	b.1.26.1	136225