# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2evbA	74	2.189		
3crkC	87	3.726		
1y8oB	128	4.068	b.84.1.1	122759
1kkhA	317	36.79	d.14.1.5,d.58.26.3	72645,72646
1bdo	80	36.89		
1bdoA	80	38.78	b.84.1.1	28214
1zkoA	136	40.23		
3cxjA	165	45.67		
2vchA	480	45.71		
1am2A	199	46.44	b.86.1.2	28381
2dc0A	434	47.52		
2q4zA	312	49.62		
1hpcA	131	60.61	b.84.1.1	28221
2dfkA	402	65.51		
2qj8A	332	68.57		
1yx1A	264	71.38	c.1.15.7	124169
3cdxA	354	73.22		
3bdwA	123	76.46		
2gu2A	312	77.45		
2axpA	173	82.75	c.37.1.1	127497
1ayoA	130	83.21	b.2.4.1	22431
1fgyA	127	85.51	b.55.1.1	26976
2ogeA	399	87.29