Best Alignments for T0397

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2evbA	1.4095e-01	2evbA/T0397-2evbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zkoA	4.1316e-01	1zkoA/T0397-1zkoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bdo	4.9883e-01	1bdo/T0397-1bdo-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1htp	7.8588e-01	1htp/T0397-1htp-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hpcA	8.2177e-01	1hpcA/T0397-1hpcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1y8oB	8.5331e-01	1y8oB/T0397-1y8oB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
1ghj	9.5658e-01	1ghj/T0397-1ghj-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3crkC	1.2195e+00	3crkC/T0397-3crkC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bdoA	1.5908e+00	1bdoA/T0397-1bdoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
2q4zA	2.2075e+00	2q4zA/T0397-2q4zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k8mA	2.3465e+00	1k8mA/T0397-1k8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.1.1
2qj8A	2.6090e+00	2qj8A/T0397-2qj8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2awkA	3.1220e+00	2awkA/T0397-2awkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cdxA	4.1572e+00	3cdxA/T0397-3cdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bcoA	6.5108e+00	2bcoA/T0397-2bcoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.7
2au3A	1.6874e+01	2au3A/T0397-2au3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t5eA	1.8738e+01	1t5eA/T0397-1t5eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.46.1.1
1whmA	2.4766e+01	1whmA/T0397-1whmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.10.1
1yw4A	2.5830e+01	1yw4A/T0397-1yw4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.7
2r44A	4.4596e+01	2r44A/T0397-2r44A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001