PFRMAT SS
TARGET T0396
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0396.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 141
METHOD
MODEL 1
G C 0.980
S C 0.918
M H 0.454
L G 0.412
H G 0.508
W H 0.403
G H 0.395
P H 0.934
K H 0.976
Y H 0.978
W H 0.987
R H 0.987
S H 0.984
L H 0.982
H H 0.981
L H 0.979
Y H 0.975
A H 0.936
I H 0.753
F H 0.569
F C 0.381
S C 0.514
D C 0.404
A C 0.603
P C 0.824
S C 0.891
W H 0.862
K H 0.886
E H 0.895
K H 0.973
Y H 0.960
E H 0.956
A H 0.982
I H 0.990
Q H 0.984
W H 0.981
I H 0.982
L H 0.953
N H 0.898
F H 0.814
I H 0.510
E T 0.454
S H 0.327
L C 0.346
P C 0.565
C C 0.689
T H 0.935
R H 0.945
C H 0.966
Q H 0.984
H H 0.975
H H 0.957
A H 0.977
F H 0.985
S H 0.981
Y H 0.973
L H 0.954
T H 0.793
K H 0.555
N C 0.490
P C 0.703
L C 0.823
T C 0.677
L C 0.616
N C 0.457
N C 0.444
S H 0.819
E H 0.902
D H 0.951
F H 0.983
Q H 0.990
Y H 0.993
W H 0.995
T H 0.995
F H 0.988
A H 0.958
F H 0.931
H H 0.924
N H 0.904
N H 0.946
V H 0.965
N H 0.953
N H 0.941
R H 0.896
L T 0.524
N T 0.541
K C 0.651
K C 0.642
I C 0.558
I C 0.418
S C 0.568
W C 0.394
S H 0.254
E H 0.255
Y H 0.384
K H 0.456
N H 0.494
I H 0.534
Y H 0.449
E H 0.314
Q H 0.250
S C 0.455
I C 0.521
L C 0.724
K C 0.993
END