Best Alignments for T0396

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1oqcA	1.8300e-19	1oqcA/T0396-1oqcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.24.15.1
1jr8A	6.2887e-19	1jr8A/T0396-1jr8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.24.15.1
2nytA	1.8273e+00	2nytA/T0396-2nytA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2aj0A	4.9936e+00	2aj0A/T0396-2aj0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ctt	8.2505e+00	1ctt/T0396-1ctt-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wn5A	8.9708e+00	1wn5A/T0396-1wn5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.97.1.1
2z3hA	9.5005e+00	2z3hA/T0396-2z3hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cc8A	9.5589e+00	1cc8A/T0396-1cc8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.17.1
1cttA	1.1237e+01	1cttA/T0396-1cttA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.97.1.1 c.97.1.1
1wkqA	1.2008e+01	1wkqA/T0396-1wkqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.97.1.2
3b8fA	1.3061e+01	3b8fA/T0396-3b8fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r5tA	1.8105e+01	1r5tA/T0396-1r5tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.97.1.1
2ds5A	1.8568e+01	2ds5A/T0396-2ds5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.11
2fqhA	1.9612e+01	2fqhA/T0396-2fqhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ovxA	1.9702e+01	1ovxA/T0396-1ovxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.11
2q3pA	2.0624e+01	2q3pA/T0396-2q3pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.4.4
2a8nA	2.2172e+01	2a8nA/T0396-2a8nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.97.1.2
1uwzA	2.2949e+01	1uwzA/T0396-1uwzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.97.1.1
2b3jA	2.4684e+01	2b3jA/T0396-2b3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.97.1.2
2hvwA	2.7662e+01	2hvwA/T0396-2hvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001