# List of top-scoring protein chains for T0396.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1oqcA	125	3.73e-11	a.24.15.1	87264
2hj3A	125	5.09e-10		
1jr8A	117	7.12e-10	a.24.15.1	67115
2d30A	141	18.68	c.97.1.1	131190
1cc8A	73	31.57	d.58.17.1	39343
3b8fA	142	36.20		
2riqA	160	47.01		
2fqhA	109	47.79		
2jywA	195	48.47		
2cycA	375	63.16		
2z4iA	233	65.65		
2z3iA	130	67.56		
2adrA	60	67.66	g.37.1.1,g.37.1.1	45030,45031
2z3hA	130	67.79		
2elvA	36	73.14		
2jufA	105	73.66		
1ct9A	553	78.36	c.26.2.1,d.153.1.1	31616,41834
2z3jA	130	81.94		
2eosA	42	85.06