PFRMAT RR
TARGET T0396
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
GSMLHWGPKYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIESLPCTRCQ
HHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNNRLNKKIISWSEYKNIYE
QSILK
3 12 0 8 0.459645
3 13 0 8 0.554016
3 14 0 8 0.511453
3 17 0 8 0.497505
3 18 0 8 0.547141
3 19 0 8 0.539608
3 21 0 8 0.616186
3 33 0 8 0.513727
3 36 0 8 0.486047
3 39 0 8 0.451914
3 40 0 8 0.528444
3 41 0 8 0.512513
3 43 0 8 0.50057
3 44 0 8 0.609719
3 45 0 8 0.659374
3 46 0 8 0.452835
3 48 0 8 0.534298
3 49 0 8 0.51393
3 52 0 8 0.475231
3 56 0 8 0.449911
3 60 0 8 0.513967
3 70 0 8 0.472629
3 75 0 8 0.491652
3 77 0 8 0.486865
3 90 0 8 0.456293
3 92 0 8 0.546454
3 95 0 8 0.479128
3 98 0 8 0.531321
4 13 0 8 0.462631
4 19 0 8 0.454597
4 43 0 8 0.455352
4 44 0 8 0.531723
4 46 0 8 0.479104
4 48 0 8 0.456595
4 49 0 8 0.53661
4 71 0 8 0.489061
4 98 0 8 0.478478
5 19 0 8 0.502113
5 44 0 8 0.496617
5 49 0 8 0.498829
5 92 0 8 0.49196
6 15 0 8 0.674118
6 16 0 8 0.701481
6 17 0 8 0.672872
6 18 0 8 0.592672
6 19 0 8 0.701265
6 21 0 8 0.582588
6 30 0 8 0.546349
6 33 0 8 0.676648
6 36 0 8 0.589529
6 37 0 8 0.506317
6 39 0 8 0.617602
6 40 0 8 0.56696
6 41 0 8 0.570761
6 43 0 8 0.534471
6 44 0 8 0.726697
6 45 0 8 0.537202
6 46 0 8 0.613729
6 48 0 8 0.45324
6 49 0 8 0.704885
6 52 0 8 0.524481
6 53 0 8 0.753546
6 62 0 8 0.4818
6 64 0 8 0.52073
6 70 0 8 0.52622
6 71 0 8 0.481359
6 72 0 8 0.456149
6 73 0 8 0.557055
6 74 0 8 0.608602
6 75 0 8 0.718223
6 79 0 8 0.463297
6 81 0 8 0.461114
6 90 0 8 0.566207
6 92 0 8 0.622216
6 95 0 8 0.463882
6 98 0 8 0.4572
7 16 0 8 0.545347
7 18 0 8 0.528476
7 19 0 8 0.470182
7 21 0 8 0.455208
7 30 0 8 0.50201
7 36 0 8 0.535429
7 44 0 8 0.60288
7 45 0 8 0.676439
7 46 0 8 0.650543
7 49 0 8 0.722877
7 52 0 8 0.461218
7 53 0 8 0.464847
7 90 0 8 0.468294
8 17 0 8 0.762957
8 18 0 8 0.694166
8 19 0 8 0.759489
8 20 0 8 0.464185
8 21 0 8 0.520735
8 30 0 8 0.549231
8 33 0 8 0.726735
8 34 0 8 0.487554
8 36 0 8 0.579166
8 37 0 8 0.509361
8 39 0 8 0.621841
8 40 0 8 0.584054
8 41 0 8 0.675385
8 43 0 8 0.619132
8 44 0 8 0.687968
8 45 0 8 0.602053
8 46 0 8 0.598115
8 48 0 8 0.675917
8 49 0 8 0.684038
8 52 0 8 0.511584
8 53 0 8 0.688554
8 56 0 8 0.512237
8 72 0 8 0.471117
8 73 0 8 0.483662
8 74 0 8 0.534903
8 75 0 8 0.701706
8 79 0 8 0.466035
8 90 0 8 0.500362
8 92 0 8 0.654621
8 98 0 8 0.536156
9 49 0 8 0.546919
10 19 0 8 0.801654
10 20 0 8 0.484862
10 21 0 8 0.640053
10 29 0 8 0.465913
10 30 0 8 0.566089
10 33 0 8 0.796051
10 34 0 8 0.607298
10 36 0 8 0.726349
10 37 0 8 0.777531
10 39 0 8 0.642174
10 40 0 8 0.737384
10 41 0 8 0.733991
10 43 0 8 0.496931
10 44 0 8 0.670645
10 45 0 8 0.505037
10 46 0 8 0.51615
10 49 0 8 0.672004
10 52 0 8 0.621643
10 53 0 8 0.829856
10 56 0 8 0.517629
10 57 0 8 0.519383
10 62 0 8 0.472822
10 64 0 8 0.503569
10 70 0 8 0.60952
10 71 0 8 0.58963
10 72 0 8 0.530543
10 73 0 8 0.682968
10 74 0 8 0.839216
10 75 0 8 0.78833
10 77 0 8 0.491094
10 78 0 8 0.460174
10 79 0 8 0.475915
10 81 0 8 0.543085
10 90 0 8 0.586092
10 92 0 8 0.716116
10 95 0 8 0.514462
10 98 0 8 0.519378
11 21 0 8 0.509516
11 30 0 8 0.484345
11 33 0 8 0.664246
11 34 0 8 0.477803
11 36 0 8 0.603097
11 37 0 8 0.812199
11 39 0 8 0.486528
11 40 0 8 0.670094
11 41 0 8 0.516329
11 44 0 8 0.547778
11 45 0 8 0.468181
11 46 0 8 0.706089
11 49 0 8 0.764755
11 52 0 8 0.500601
11 53 0 8 0.779014
11 57 0 8 0.497751
11 64 0 8 0.481148
11 70 0 8 0.546863
11 71 0 8 0.471018
11 73 0 8 0.70082
11 74 0 8 0.747347
11 75 0 8 0.500133
11 77 0 8 0.468173
11 78 0 8 0.546396
11 79 0 8 0.555942
11 81 0 8 0.555945
11 82 0 8 0.516955
12 21 0 8 0.482606
12 30 0 8 0.511622
12 33 0 8 0.75463
12 36 0 8 0.55136
12 37 0 8 0.685871
12 38 0 8 0.45155
12 40 0 8 0.586658
12 41 0 8 0.616272
12 49 0 8 0.570905
12 53 0 8 0.718812
12 56 0 8 0.486477
12 57 0 8 0.515095
12 70 0 8 0.504895
12 71 0 8 0.475039
12 73 0 8 0.573754
12 74 0 8 0.748039
12 75 0 8 0.467146
12 77 0 8 0.471612
12 81 0 8 0.459921
12 92 0 8 0.454403
12 95 0 8 0.477721
13 33 0 8 0.858446
13 34 0 8 0.617986
13 36 0 8 0.728682
13 37 0 8 0.884381
13 39 0 8 0.566855
13 40 0 8 0.783841
13 41 0 8 0.777535
13 43 0 8 0.531362
13 44 0 8 0.595385
13 46 0 8 0.461172
13 49 0 8 0.72406
13 53 0 8 0.877424
13 56 0 8 0.580217
13 57 0 8 0.676744
13 70 0 8 0.635836
13 71 0 8 0.621844
13 72 0 8 0.631026
13 73 0 8 0.825841
13 74 0 8 0.836079
13 75 0 8 0.722789
13 77 0 8 0.562921
13 78 0 8 0.556467
13 79 0 8 0.513617
13 81 0 8 0.633525
13 85 0 8 0.546966
13 92 0 8 0.468671
13 95 0 8 0.528735
14 30 0 8 0.71634
14 33 0 8 0.95519
14 34 0 8 0.840171
14 36 0 8 0.964722
14 37 0 8 0.953291
14 39 0 8 0.786453
14 40 0 8 0.923837
14 41 0 8 0.920366
14 43 0 8 0.729456
14 44 0 8 0.829669
14 45 0 8 0.586528
14 46 0 8 0.600944
14 49 0 8 0.836123
14 50 0 8 0.543151
14 52 0 8 0.673675
14 53 0 8 0.938037
14 54 0 8 0.487353
14 56 0 8 0.887072
14 57 0 8 0.892718
14 64 0 8 0.615302
14 70 0 8 0.90027
14 71 0 8 0.796281
14 72 0 8 0.64351
14 73 0 8 0.847759
14 74 0 8 0.910471
14 75 0 8 0.83774
14 77 0 8 0.777096
14 78 0 8 0.739049
14 79 0 8 0.646729
14 81 0 8 0.818759
14 82 0 8 0.604119
14 85 0 8 0.6555
14 89 0 8 0.456445
14 90 0 8 0.757685
14 92 0 8 0.512515
14 95 0 8 0.731795
14 98 0 8 0.591633
14 99 0 8 0.595206
15 30 0 8 0.568534
15 33 0 8 0.785864
15 34 0 8 0.564356
15 36 0 8 0.730161
15 37 0 8 0.845406
15 38 0 8 0.460658
15 39 0 8 0.580555
15 40 0 8 0.779596
15 41 0 8 0.669673
15 43 0 8 0.561069
15 44 0 8 0.684725
15 45 0 8 0.536603
15 46 0 8 0.719267
15 49 0 8 0.810964
15 50 0 8 0.450042
15 52 0 8 0.579653
15 53 0 8 0.886158
15 56 0 8 0.540329
15 57 0 8 0.582107
15 64 0 8 0.625153
15 70 0 8 0.729725
15 71 0 8 0.609
15 72 0 8 0.554325
15 73 0 8 0.817313
15 74 0 8 0.835733
15 75 0 8 0.639703
15 77 0 8 0.51972
15 78 0 8 0.73297
15 79 0 8 0.612111
15 81 0 8 0.725595
15 82 0 8 0.615388
15 85 0 8 0.581367
15 90 0 8 0.496658
15 92 0 8 0.494421
15 95 0 8 0.510737
15 99 0 8 0.534958
16 29 0 8 0.519912
16 30 0 8 0.618218
16 33 0 8 0.884849
16 36 0 8 0.797201
16 37 0 8 0.863022
16 39 0 8 0.704927
16 40 0 8 0.827033
16 41 0 8 0.758229
16 43 0 8 0.535369
16 44 0 8 0.637601
16 45 0 8 0.524833
16 46 0 8 0.543737
16 49 0 8 0.77223
16 50 0 8 0.486971
16 53 0 8 0.876932
16 56 0 8 0.602962
16 57 0 8 0.795168
16 62 0 8 0.488208
16 64 0 8 0.538857
16 70 0 8 0.791687
16 71 0 8 0.665151
16 73 0 8 0.770232
16 74 0 8 0.820839
16 75 0 8 0.664292
16 77 0 8 0.555619
16 78 0 8 0.594472
16 79 0 8 0.500056
16 81 0 8 0.633893
16 85 0 8 0.48187
16 90 0 8 0.531121
16 92 0 8 0.524297
16 95 0 8 0.529619
16 98 0 8 0.452239
16 99 0 8 0.46314
17 30 0 8 0.583339
17 31 0 8 0.487922
17 33 0 8 0.888756
17 34 0 8 0.662151
17 36 0 8 0.825726
17 37 0 8 0.887634
17 39 0 8 0.645496
17 40 0 8 0.853931
17 41 0 8 0.872419
17 42 0 8 0.454199
17 43 0 8 0.680211
17 44 0 8 0.685119
17 46 0 8 0.497951
17 49 0 8 0.734406
17 52 0 8 0.552078
17 53 0 8 0.882589
17 54 0 8 0.452455
17 56 0 8 0.655159
17 57 0 8 0.721166
17 60 0 8 0.455106
17 64 0 8 0.48404
17 70 0 8 0.771836
17 71 0 8 0.739951
17 72 0 8 0.57134
17 73 0 8 0.753356
17 74 0 8 0.906417
17 75 0 8 0.820554
17 77 0 8 0.610453
17 78 0 8 0.514746
17 79 0 8 0.47587
17 81 0 8 0.631519
17 85 0 8 0.502843
17 90 0 8 0.573197
17 92 0 8 0.559762
17 95 0 8 0.651346
18 30 0 8 0.69322
18 31 0 8 0.497932
18 33 0 8 0.943919
18 36 0 8 0.87063
18 37 0 8 0.909076
18 39 0 8 0.65258
18 40 0 8 0.892735
18 41 0 8 0.851756
18 43 0 8 0.649532
18 44 0 8 0.752492
18 45 0 8 0.570879
18 46 0 8 0.595153
18 49 0 8 0.824517
18 52 0 8 0.552536
18 53 0 8 0.910266
18 56 0 8 0.816972
18 57 0 8 0.854155
18 64 0 8 0.569068
18 70 0 8 0.828579
18 71 0 8 0.736341
18 72 0 8 0.652591
18 73 0 8 0.807857
18 74 0 8 0.907063
18 75 0 8 0.794173
18 77 0 8 0.670143
18 78 0 8 0.701468
18 79 0 8 0.568761
18 81 0 8 0.80592
18 82 0 8 0.519718
18 85 0 8 0.753701
18 89 0 8 0.463819
18 90 0 8 0.541107
18 92 0 8 0.503458
18 95 0 8 0.666364
18 98 0 8 0.558263
18 99 0 8 0.598419
19 29 0 8 0.637661
19 30 0 8 0.845966
19 31 0 8 0.584076
19 32 0 8 0.475116
19 33 0 8 0.940493
19 34 0 8 0.732117
19 36 0 8 0.92687
19 37 0 8 0.893794
19 39 0 8 0.692487
19 40 0 8 0.867475
19 41 0 8 0.928505
19 43 0 8 0.799791
19 44 0 8 0.812886
19 45 0 8 0.601222
19 46 0 8 0.618605
19 48 0 8 0.565159
19 49 0 8 0.774052
19 50 0 8 0.512113
19 52 0 8 0.636782
19 53 0 8 0.89396
19 54 0 8 0.485677
19 56 0 8 0.727563
19 57 0 8 0.836833
19 62 0 8 0.646907
19 64 0 8 0.716129
19 70 0 8 0.773573
19 71 0 8 0.645698
19 72 0 8 0.661222
19 73 0 8 0.728662
19 74 0 8 0.856749
19 75 0 8 0.832004
19 77 0 8 0.570166
19 78 0 8 0.591285
19 79 0 8 0.537216
19 81 0 8 0.726302
19 82 0 8 0.523438
19 85 0 8 0.838096
19 87 0 8 0.519639
19 89 0 8 0.580775
19 90 0 8 0.742552
19 92 0 8 0.787299
19 95 0 8 0.74299
19 96 0 8 0.483126
19 98 0 8 0.800863
19 99 0 8 0.686717
19 103 0 8 0.519285
20 29 0 8 0.478789
20 33 0 8 0.693849
20 37 0 8 0.50208
20 40 0 8 0.457743
20 44 0 8 0.464188
20 46 0 8 0.481058
20 49 0 8 0.628347
20 52 0 8 0.481626
20 53 0 8 0.711661
20 56 0 8 0.4554
20 60 0 8 0.471978
20 70 0 8 0.598056
20 103 0 8 0.47333
21 30 0 8 0.780949
21 33 0 8 0.768516
21 34 0 8 0.481536
21 36 0 8 0.685746
21 37 0 8 0.577867
21 40 0 8 0.510567
21 41 0 8 0.632307
21 43 0 8 0.487967
21 44 0 8 0.573501
21 45 0 8 0.56512
21 46 0 8 0.547243
21 48 0 8 0.450063
21 49 0 8 0.671884
21 52 0 8 0.54231
21 53 0 8 0.553926
21 56 0 8 0.515878
21 57 0 8 0.553916
21 60 0 8 0.497947
21 62 0 8 0.781659
21 70 0 8 0.525483
21 71 0 8 0.469468
21 74 0 8 0.452038
21 75 0 8 0.488033
21 81 0 8 0.544523
21 85 0 8 0.551348
21 90 0 8 0.540483
21 92 0 8 0.528774
21 95 0 8 0.525655
21 98 0 8 0.52468
21 103 0 8 0.459773
22 36 0 8 0.494703
22 46 0 8 0.490504
22 49 0 8 0.58184
22 62 0 8 0.542336
27 36 0 8 0.524461
27 38 0 8 0.460434
27 48 0 8 0.588089
27 49 0 8 0.50046
29 62 0 8 0.471204
30 39 0 8 0.506718
30 40 0 8 0.6156
30 41 0 8 0.712672
30 44 0 8 0.474142
30 45 0 8 0.668508
30 46 0 8 0.450534
30 48 0 8 0.52999
30 49 0 8 0.559117
30 52 0 8 0.523055
30 56 0 8 0.561162
30 57 0 8 0.768834
30 60 0 8 0.599163
30 62 0 8 0.655851
30 64 0 8 0.489867
30 70 0 8 0.511904
30 74 0 8 0.488771
30 75 0 8 0.58531
30 90 0 8 0.570611
30 92 0 8 0.498445
30 95 0 8 0.546899
30 98 0 8 0.495227
31 48 0 8 0.562757
31 49 0 8 0.471427
33 43 0 8 0.693316
33 44 0 8 0.633583
33 48 0 8 0.590149
33 49 0 8 0.615708
33 50 0 8 0.505917
33 52 0 8 0.564667
33 53 0 8 0.861586
33 54 0 8 0.497262
33 56 0 8 0.726317
33 57 0 8 0.776948
33 60 0 8 0.526845
33 64 0 8 0.496495
33 70 0 8 0.775922
33 71 0 8 0.740798
33 72 0 8 0.597431
33 73 0 8 0.700668
33 74 0 8 0.796248
33 75 0 8 0.754625
33 77 0 8 0.536663
33 81 0 8 0.662094
33 85 0 8 0.619834
33 90 0 8 0.518513
33 92 0 8 0.533358
33 95 0 8 0.672362
33 96 0 8 0.469522
33 98 0 8 0.545099
33 99 0 8 0.493359
34 43 0 8 0.642949
34 44 0 8 0.679034
34 45 0 8 0.468293
34 46 0 8 0.46392
34 48 0 8 0.693624
34 49 0 8 0.615621
34 52 0 8 0.618596
34 53 0 8 0.69984
34 54 0 8 0.470679
34 56 0 8 0.856798
34 57 0 8 0.842808
34 60 0 8 0.692021
34 62 0 8 0.558009
34 63 0 8 0.47696
34 64 0 8 0.619331
34 71 0 8 0.524539
34 72 0 8 0.565191
34 74 0 8 0.647227
34 75 0 8 0.591956
34 81 0 8 0.55442
34 85 0 8 0.617773
34 89 0 8 0.517735
34 90 0 8 0.648801
34 92 0 8 0.59801
34 95 0 8 0.463859
34 96 0 8 0.465607
34 98 0 8 0.55493
34 103 0 8 0.464611
36 45 0 8 0.50725
36 49 0 8 0.616503
36 52 0 8 0.517142
36 53 0 8 0.714223
36 56 0 8 0.668288
36 57 0 8 0.598374
36 70 0 8 0.790786
36 71 0 8 0.508119
36 72 0 8 0.45104
36 73 0 8 0.497002
36 74 0 8 0.686288
36 75 0 8 0.551427
36 77 0 8 0.465132
36 81 0 8 0.536927
36 85 0 8 0.528872
36 90 0 8 0.45772
36 95 0 8 0.544815
37 46 0 8 0.597495
37 48 0 8 0.473685
37 49 0 8 0.775464
37 50 0 8 0.581562
37 52 0 8 0.72114
37 53 0 8 0.941508
37 56 0 8 0.862126
37 57 0 8 0.901529
37 60 0 8 0.508333
37 64 0 8 0.561209
37 70 0 8 0.749322
37 71 0 8 0.622912
37 72 0 8 0.54726
37 73 0 8 0.799674
37 74 0 8 0.893213
37 75 0 8 0.714166
37 77 0 8 0.692981
37 78 0 8 0.588563
37 79 0 8 0.598963
37 81 0 8 0.745352
37 82 0 8 0.552702
37 85 0 8 0.650644
37 95 0 8 0.553418
37 99 0 8 0.456714
38 48 0 8 0.592318
38 49 0 8 0.659414
38 52 0 8 0.542749
38 53 0 8 0.735526
38 54 0 8 0.620363
38 56 0 8 0.595637
38 60 0 8 0.516029
38 62 0 8 0.483924
38 64 0 8 0.55838
38 71 0 8 0.503555
38 73 0 8 0.503434
38 85 0 8 0.702576
38 92 0 8 0.468445
38 95 0 8 0.472264
39 49 0 8 0.647014
39 53 0 8 0.707573
39 56 0 8 0.468816
39 57 0 8 0.500661
39 70 0 8 0.528324
39 74 0 8 0.609626
40 49 0 8 0.789694
40 50 0 8 0.454203
40 53 0 8 0.920754
40 56 0 8 0.675666
40 57 0 8 0.830492
40 64 0 8 0.508113
40 70 0 8 0.727163
40 71 0 8 0.652589
40 72 0 8 0.573152
40 73 0 8 0.743396
40 74 0 8 0.835708
40 75 0 8 0.710124
40 77 0 8 0.579981
40 78 0 8 0.513369
40 79 0 8 0.458727
40 81 0 8 0.621889
40 85 0 8 0.676708
40 90 0 8 0.504346
40 95 0 8 0.578009
41 50 0 8 0.543959
41 52 0 8 0.708904
41 53 0 8 0.892202
41 54 0 8 0.804367
41 56 0 8 0.853086
41 57 0 8 0.893305
41 60 0 8 0.706214
41 62 0 8 0.673367
41 63 0 8 0.664164
41 64 0 8 0.6667
41 69 0 8 0.459949
41 70 0 8 0.746855
41 71 0 8 0.698093
41 72 0 8 0.55201
41 73 0 8 0.745323
41 74 0 8 0.859321
41 75 0 8 0.783654
41 77 0 8 0.555233
41 78 0 8 0.468487
41 81 0 8 0.6345
41 85 0 8 0.723301
41 89 0 8 0.556416
41 90 0 8 0.843264
41 92 0 8 0.751876
41 95 0 8 0.670792
41 96 0 8 0.579296
41 98 0 8 0.79051
41 99 0 8 0.547811
41 103 0 8 0.489558
42 52 0 8 0.563875
42 53 0 8 0.614946
42 56 0 8 0.456313
42 60 0 8 0.529405
42 62 0 8 0.484269
42 74 0 8 0.525174
42 75 0 8 0.558109
43 53 0 8 0.792114
43 56 0 8 0.612372
43 57 0 8 0.618078
43 60 0 8 0.50866
43 62 0 8 0.487482
43 64 0 8 0.58769
43 70 0 8 0.573598
43 71 0 8 0.518217
43 73 0 8 0.618787
43 74 0 8 0.704963
43 75 0 8 0.594778
43 78 0 8 0.456145
43 79 0 8 0.472165
43 81 0 8 0.607944
43 85 0 8 0.618619
43 89 0 8 0.454423
43 90 0 8 0.532384
43 92 0 8 0.606512
43 95 0 8 0.660234
43 98 0 8 0.475202
43 99 0 8 0.50238
44 53 0 8 0.883781
44 56 0 8 0.650184
44 57 0 8 0.616776
44 60 0 8 0.530539
44 62 0 8 0.581725
44 64 0 8 0.615056
44 70 0 8 0.636525
44 71 0 8 0.526134
44 72 0 8 0.46528
44 73 0 8 0.605065
44 74 0 8 0.65612
44 75 0 8 0.660026
44 79 0 8 0.471313
44 81 0 8 0.601792
44 85 0 8 0.60564
44 90 0 8 0.648017
44 92 0 8 0.673559
44 95 0 8 0.618031
44 98 0 8 0.527414
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END