Best Alignments for T0395

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2oq2A	1.9771e-25	2oq2A/T0395-2oq2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2goyA	1.0049e-23	2goyA/T0395-2goyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sur	7.4221e-22	1sur/T0395-1sur-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1surA	1.8849e-21	1surA/T0395-1surA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
1zunA	2.8591e-21	1zunA/T0395-1zunA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
1ni5A	1.0230e-14	1ni5A/T0395-1ni5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.153.1.2 d.229.1.1 c.26.2.5
1wy5A	1.0114e-13	1wy5A/T0395-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.5 d.229.1.1
2pg3A	3.3029e-12	2pg3A/T0395-2pg3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xngA	6.0173e-12	1xngA/T0395-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1k92A	1.0984e-11	1k92A/T0395-1k92A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
2hmaA	1.2427e-11	2hmaA/T0395-2hmaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dplA	1.6196e-11	2dplA/T0395-2dplA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vl2A	1.8139e-10	1vl2A/T0395-1vl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1kqpA	3.0460e-10	1kqpA/T0395-1kqpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1korA	3.1552e-10	1korA/T0395-1korA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1ru8A	8.0631e-10	1ru8A/T0395-1ru8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1wxiA	8.3172e-10	1wxiA/T0395-1wxiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
2e18A	3.6383e-09	2e18A/T0395-2e18A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gpmA	2.1044e-08	1gpmA/T0395-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.16.1 c.26.2.1 d.52.2.1
2c5sA	2.5184e-08	2c5sA/T0395-2c5sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.6 d.308.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001