Best Alignments for T0395

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2oq2A	3.3107e-34	2oq2A/T0395-2oq2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2goyA	1.0824e-33	2goyA/T0395-2goyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1surA	4.9814e-30	1surA/T0395-1surA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
1sur	3.3115e-29	1sur/T0395-1sur-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zunA	4.3970e-24	1zunA/T0395-1zunA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
1wy5A	3.9201e-06	1wy5A/T0395-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.5 d.229.1.1
2dplA	1.0878e-05	2dplA/T0395-2dplA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ni5A	1.2860e-05	1ni5A/T0395-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.153.1.2 d.229.1.1 c.26.2.5
1gpmA	2.6352e-05	1gpmA/T0395-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.16.1 c.26.2.1 d.52.2.1
1xngA	1.2378e-04	1xngA/T0395-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
2pg3A	1.8165e-04	2pg3A/T0395-2pg3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e18A	8.6520e-04	2e18A/T0395-2e18A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vl2A	1.3006e-03	1vl2A/T0395-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1k92A	3.7210e-03	1k92A/T0395-1k92A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1ru8A	1.2807e-02	1ru8A/T0395-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
2nsyA	1.3591e-02	2nsyA/T0395-2nsyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1korA	1.8182e-02	1korA/T0395-1korA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
2c5sA	3.2944e-02	2c5sA/T0395-2c5sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.6 d.308.1.1
2hmaA	7.9285e-02	2hmaA/T0395-2hmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wxiA	8.2047e-02	1wxiA/T0395-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001