# List of top-scoring protein chains for T0395.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2goyA	275	7.98e-17		
2oq2A	261	9.85e-16		
2o8vA	252	1.63e-14		
1surA	215	3.12e-13	c.26.2.2	31620
1zunA	325	1.23e-12	c.26.2.2	125676
2e18A	257	0.1419		
2ywbA	503	0.2746		
1gpmA	525	0.4282	c.23.16.1,c.26.2.1,d.52.2.1	31405,31608,38826
1wy5A	317	2.724	c.26.2.5,d.229.1.1	121428,121429
2dplA	308	3.714		
1ni5A	433	4.466	b.153.1.2,d.229.1.1,c.26.2.5	111592,111593,80533
2pg3A	232	7.725		
1k92A	455	11.58	c.26.2.1,d.210.1.1	68325,68326
2d13A	227	16.35	c.26.2.1	131121
1n1cA	217	17.02	a.184.1.1	85254
1xngA	268	19.02	c.26.2.1	122186
1q15A	503	21.73	c.26.2.1,d.153.1.1	95538,95539
2hmaA	376	32.72		
1d7qA	143	47.93	b.40.4.5	25331
1tlqA	189	59.07	a.195.1.1	107134
1xbtA	193	68.12	c.37.1.24,g.39.1.14	115080,115081
1k0wA	231	73.73	c.74.1.1	77220
1jdiA	231	73.96	c.74.1.1	66551
2orvA	234	79.02	c.37.1.24,g.39.1.14	139274,139275
1pk1A	89	80.15	a.60.1.2	118711
1wymA	155	84.26		
1w4rA	195	89.53