Best Alignments for T0395

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2oq2A	4.3578e-22	2oq2A/T0395-2oq2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2goyA	2.6419e-20	2goyA/T0395-2goyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sur	3.6969e-19	1sur/T0395-1sur-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1surA	1.2665e-18	1surA/T0395-1surA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
1zunA	2.3639e-18	1zunA/T0395-1zunA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
1ni5A	7.1944e-18	1ni5A/T0395-1ni5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.153.1.2 d.229.1.1 c.26.2.5
2pg3A	9.1350e-18	2pg3A/T0395-2pg3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hmaA	1.0879e-15	2hmaA/T0395-2hmaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wy5A	1.7305e-15	1wy5A/T0395-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.5 d.229.1.1
1k92A	2.0371e-14	1k92A/T0395-1k92A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1xngA	8.6459e-14	1xngA/T0395-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
2dplA	2.2826e-13	2dplA/T0395-2dplA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vl2A	3.1287e-13	1vl2A/T0395-1vl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1korA	6.0087e-13	1korA/T0395-1korA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1gpmA	9.2054e-13	1gpmA/T0395-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.16.1 c.26.2.1 d.52.2.1
1kqpA	6.7515e-12	1kqpA/T0395-1kqpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1ru8A	6.9305e-12	1ru8A/T0395-1ru8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1wxiA	7.6950e-12	1wxiA/T0395-1wxiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
2e18A	1.3436e-11	2e18A/T0395-2e18A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2c5sA	1.5204e-11	2c5sA/T0395-2c5sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.6 d.308.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001