Best Alignments for T0395

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2oq2A	2.6747e-25	2oq2A/T0395-2oq2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zunA	5.0585e-24	1zunA/T0395-1zunA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
2goyA	5.2782e-23	2goyA/T0395-2goyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sur	1.3682e-21	1sur/T0395-1sur-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1surA	1.1757e-20	1surA/T0395-1surA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.2
1wy5A	1.5480e-15	1wy5A/T0395-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.5 d.229.1.1
1ni5A	2.5069e-15	1ni5A/T0395-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.153.1.2 d.229.1.1 c.26.2.5
1xngA	1.7453e-13	1xngA/T0395-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1kqpA	9.4385e-13	1kqpA/T0395-1kqpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1k92A	1.3471e-12	1k92A/T0395-1k92A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
2dplA	3.6629e-12	2dplA/T0395-2dplA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wxiA	1.8580e-11	1wxiA/T0395-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
2hmaA	2.7304e-11	2hmaA/T0395-2hmaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ru8A	5.9326e-11	1ru8A/T0395-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
1korA	1.0604e-10	1korA/T0395-1korA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
1vl2A	2.4306e-10	1vl2A/T0395-1vl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.210.1.1
2d13A	5.5980e-09	2d13A/T0395-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1
2e18A	1.1552e-08	2e18A/T0395-2e18A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m1zA	1.4093e-08	1m1zA/T0395-1m1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.2.1 d.153.1.1
2pg3A	2.2576e-08	2pg3A/T0395-2pg3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001