Best Alignments for T0393

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2i76A	3.4196e-14	2i76A/T0393-2i76A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vmeA	1.5934e+01	1vmeA/T0393-1vmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.5.1 d.157.1.3
2i5tA	1.6796e+01	2i5tA/T0393-2i5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c24A	1.7733e+01	3c24A/T0393-3c24A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hx5A	2.0871e+01	2hx5A/T0393-2hx5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.38.1.1
2b0vA	2.6825e+01	2b0vA/T0393-2b0vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fvvA	2.8518e+01	2fvvA/T0393-2fvvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1khyA	2.8564e+01	1khyA/T0393-1khyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.174.1.1
2yvpA	3.0123e+01	2yvpA/T0393-2yvpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q33A	3.0320e+01	1q33A/T0393-1q33A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b0jA	3.4898e+01	2b0jA/T0393-2b0jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.100.1.11 c.2.1.6
2a6tA	3.5805e+01	2a6tA/T0393-2a6tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mqeA	3.6300e+01	1mqeA/T0393-1mqeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k2eA	4.0249e+01	1k2eA/T0393-1k2eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i8tA	4.0350e+01	2i8tA/T0393-2i8tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yyhA	4.0816e+01	2yyhA/T0393-2yyhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b06A	4.1323e+01	2b06A/T0393-2b06A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g0sA	4.2385e+01	1g0sA/T0393-1g0sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o1cA	4.4114e+01	2o1cA/T0393-2o1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vhzA	4.4178e+01	1vhzA/T0393-1vhzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001