# List of top-scoring protein chains for t2k-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2i76A	276	6.98e-13		
2i5tA	188	7.596		
1vmeA	410	8.268	c.23.5.1,d.157.1.3	108893,108894
2hx5A	152	10.72	d.38.1.1	136837
2q9uA	414	13.70		
1khyA	148	27.02	a.174.1.1	77410
2fvgA	340	27.08	b.49.3.1,c.56.5.4	134201,134202
2jgdA	933	37.45		
2brxA	244	48.46	c.73.1.3	129028
1bvqA	141	53.38	d.38.1.1	38542
1z7gA	217	54.46	c.61.1.1	124624
3c24A	286	55.33		
1h3gA	601	56.60	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
1ueoA	63	56.89	j.107.1.1	99269
2jbhA	225	57.11		
2icrA	237	61.10		
1me8A	503	61.11	c.1.5.1	79028
2rg4A	216	61.88		
1p9rA	418	64.18	c.37.1.11	94399
1bkcI	256	66.45	d.92.1.10	40334
2ftsA	419	66.55	b.85.6.1,b.103.1.1,c.57.1.2	134079,134080,134081
2f82A	450	68.59		
1j5yA	187	70.97	a.4.5.1,d.94.2.1	71592,71593
1tf1A	198	71.60	d.110.2.2	106826
1kngA	156	73.49	c.47.1.10	72777
3b5qA	482	74.42		
3b57A	209	74.80		
2hyxA	352	76.06		
1adtA	356	78.54	a.54.1.1,g.51.1.1,g.51.1.1	17887,45362,45368
1e5dA	402	79.17	c.23.5.1,d.157.1.3	31208,42061
2co5A	99	86.17		
3bjnA	165	86.66