# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2i76A	276	4.14e-15		
2i5tA	188	2.014		
1vmeA	410	2.548	c.23.5.1,d.157.1.3	108893,108894
2hx5A	152	9.013	d.38.1.1	136837
3c24A	286	11.28		
1h3gA	601	12.54	b.1.18.2,b.71.1.1,c.1.8.1	90594,90595,90596
2b0jA	358	19.91	a.100.1.11,c.2.1.6	127639,127640
2ftsA	419	21.58	b.85.6.1,b.103.1.1,c.57.1.2	134079,134080,134081
1khyA	148	22.46	a.174.1.1	77410
1tf1A	198	22.50	d.110.2.2	106826
1odoA	408	24.67	a.104.1.1	92783
2fvgA	340	28.38	b.49.3.1,c.56.5.4	134201,134202
2jgdA	933	30.48		
1adtA	356	32.32	a.54.1.1,g.51.1.1,g.51.1.1	17887,45362,45368
2icrA	237	38.09		
2co5A	99	39.60		
2d2jA	329	40.58	c.1.9.3	131175
3b57A	209	41.12		
2q9uA	414	43.64		
1ueoA	63	43.94	j.107.1.1	99269
3b5qA	482	44.66		
1x0vA	354	47.35		
3bjnA	165	47.96		
1xmpA	170	49.32	c.23.8.1	115521
1a98A	152	65.26	c.61.1.1	34021
1bgf	124	66.44		
2jbhA	225	68.37		
1bvqA	141	69.30	d.38.1.1	38542
2ffuA	501	71.30		
1nfn	191	76.23		
1yrlA	491	78.85		
2nqrA	411	80.76	b.85.6.1,b.103.1.1,c.57.1.2	138490,138491,138492
2ou1A	77	83.69		
1u11A	182	87.18	c.23.8.1	107576
1zv1A	65	89.99