# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2i76A	276	7.90e-09		
1kngA	156	1.688	c.47.1.10	72777
1vmeA	410	15.57	c.23.5.1,d.157.1.3	108893,108894
2b1kA	168	16.60		
1khyA	148	17.61	a.174.1.1	77410
1z5yE	149	21.04	c.47.1.10	124498
2c3nA	247	23.12		
1uhvA	500	23.24	b.71.1.2,c.1.8.3	99402,99403
2b3oA	532	23.57		
1j5yA	187	26.63	a.4.5.1,d.94.2.1	71592,71593
2imfA	203	34.60		
1ji6A	589	37.50	b.18.1.3,b.77.2.1,f.1.3.1	63066,63067,63068
2h30A	164	40.30		
1r4wA	226	40.58	c.47.1.13	97050
1qmgA	524	41.99	a.100.1.2,c.2.1.6	18785,30182
2a5hA	416	48.15		
2rjoA	332	49.52		
1tiyA	164	55.76	c.97.1.2	107012
2icrA	237	57.46		
2ooqA	286	59.90		
1ekqA	272	63.92	c.72.1.2	34941
2b9wA	424	65.35		
1v8aA	265	68.60	c.72.1.2	100494
1n45A	233	74.13	a.132.1.1	79981
2a0uA	383	74.47		
1dg9A	157	78.46	c.44.1.1	32637
1c3qA	272	79.53	c.72.1.2	118436
1yzxA	226	88.44		
2b49A	287	88.93