# List of top-scoring protein chains for T0393.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2i76A	276	8.15e-07		
1d2aA	160	33.06	c.44.1.1	32644
1d1qA	161	33.06	c.44.1.1	32642
1d1pA	160	33.55	c.44.1.1	32646
2z1eA	338	48.10		
2dmfA	137	50.95		
5eauA	548	53.58	a.102.4.1,a.128.1.3	18851,19443
1hxcA	548	53.58	a.102.4.1,a.128.1.3	83643,83644
5eatA	548	68.54	a.102.4.1,a.128.1.3	18853,19445
5easA	548	68.54	a.102.4.1,a.128.1.3	18852,19444
1hxgA	548	69.44	a.102.4.1,a.128.1.3	83645,83646
1hxaA	548	69.51	a.102.4.1,a.128.1.3	83641,83642
1n10A	241	70.00	b.7.3.1,b.52.1.3	79774,79775
1y7oA	218	70.65	c.14.1.1	122701