Best Alignments for T0393

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2i76A	1.9995e+00	2i76A/T0393-2i76A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yrlA	6.9674e+00	1yrlA/T0393-1yrlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qmgA	1.4893e+01	1qmgA/T0393-1qmgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.100.1.2 c.2.1.6
1i36A	2.3983e+01	1i36A/T0393-1i36A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.100.1.8 c.2.1.6
1odoA	3.0110e+01	1odoA/T0393-1odoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.104.1.1
1np3A	3.0157e+01	1np3A/T0393-1np3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.100.1.2 c.2.1.6
2f6lA	3.3560e+01	2f6lA/T0393-2f6lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.130.1.4
2co5A	3.6711e+01	2co5A/T0393-2co5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3rA	4.0876e+01	2p3rA/T0393-2p3rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.4 c.55.1.4
2gwdA	5.4629e+01	2gwdA/T0393-2gwdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g5cA	5.6420e+01	2g5cA/T0393-2g5cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w85B	5.8419e+01	1w85B/T0393-1w85B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.36.1.7 c.48.1.2
2azwA	6.1055e+01	2azwA/T0393-2azwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d0bA	6.3340e+01	2d0bA/T0393-2d0bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r59O	6.3353e+01	1r59O/T0393-1r59O-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.4 c.55.1.4
2etbA	6.3364e+01	2etbA/T0393-2etbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a4dA	6.5030e+01	2a4dA/T0393-2a4dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.20.1.1
1z6mA	6.6398e+01	1z6mA/T0393-1z6mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.13
2f8yA	6.8257e+01	2f8yA/T0393-2f8yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qisA	7.1712e+01	2qisA/T0393-2qisA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001