PFRMAT RR
TARGET T0393
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
YDADSEQRKSLHLAAVFTCNFTNHMYALAAELLKKYNLPFDVMLPLIDET
ARKVHELEPKTAQTGPAIRYDENVIGNHLRMLADDPAMQRLYELLSRSIH
ERQ
168 177 0 8 0.564114
168 178 0 8 0.604588
168 181 0 8 0.57561
168 183 0 8 0.541319
168 185 0 8 0.539295
168 188 0 8 0.561684
168 189 0 8 0.540037
168 192 0 8 0.603264
169 178 0 8 0.564479
169 192 0 8 0.546819
170 179 0 8 0.535595
170 181 0 8 0.562474
170 185 0 8 0.564854
170 189 0 8 0.55254
170 192 0 8 0.620322
171 180 0 8 0.752458
171 181 0 8 0.833946
171 182 0 8 0.796436
171 183 0 8 0.735911
171 184 0 8 0.716196
171 185 0 8 0.828898
171 186 0 8 0.698372
171 188 0 8 0.701089
171 189 0 8 0.812417
171 192 0 8 0.761663
171 193 0 8 0.591769
171 196 0 8 0.627639
171 202 0 8 0.584996
171 203 0 8 0.691349
171 204 0 8 0.535166
171 206 0 8 0.754008
171 207 0 8 0.69772
171 210 0 8 0.720077
171 211 0 8 0.538929
171 214 0 8 0.670557
171 222 0 8 0.648088
171 224 0 8 0.672368
171 226 0 8 0.576656
171 227 0 8 0.675636
171 235 0 8 0.600344
171 238 0 8 0.597445
171 239 0 8 0.561927
171 242 0 8 0.574663
171 251 0 8 0.64233
171 255 0 8 0.720953
172 181 0 8 0.803905
172 182 0 8 0.756215
172 183 0 8 0.73369
172 184 0 8 0.708725
172 185 0 8 0.799041
172 186 0 8 0.640523
172 188 0 8 0.645324
172 189 0 8 0.774494
172 192 0 8 0.671488
172 203 0 8 0.63092
172 206 0 8 0.720825
172 207 0 8 0.645057
172 210 0 8 0.663184
172 222 0 8 0.646105
172 223 0 8 0.559388
172 224 0 8 0.717289
172 225 0 8 0.598011
172 226 0 8 0.625387
172 227 0 8 0.676742
172 231 0 8 0.535085
172 235 0 8 0.53514
172 255 0 8 0.69338
173 182 0 8 0.872615
173 183 0 8 0.823223
173 184 0 8 0.79976
173 185 0 8 0.898076
173 186 0 8 0.779568
173 188 0 8 0.75863
173 189 0 8 0.890046
173 192 0 8 0.808963
173 193 0 8 0.669778
173 196 0 8 0.668469
173 203 0 8 0.722159
173 206 0 8 0.808862
173 207 0 8 0.766391
173 210 0 8 0.779743
173 211 0 8 0.57552
173 214 0 8 0.755651
173 222 0 8 0.682309
173 223 0 8 0.569878
173 224 0 8 0.743697
173 225 0 8 0.590365
173 226 0 8 0.634329
173 227 0 8 0.730647
173 235 0 8 0.686227
173 238 0 8 0.647213
173 239 0 8 0.651867
173 242 0 8 0.684341
173 251 0 8 0.669847
173 252 0 8 0.61143
173 255 0 8 0.8245
173 256 0 8 0.595994
173 259 0 8 0.546738
174 183 0 8 0.888177
174 184 0 8 0.872543
174 185 0 8 0.937535
174 186 0 8 0.867223
174 187 0 8 0.575584
174 188 0 8 0.838935
174 189 0 8 0.932757
174 190 0 8 0.540013
174 192 0 8 0.855682
174 193 0 8 0.785091
174 196 0 8 0.711762
174 202 0 8 0.586459
174 203 0 8 0.802073
174 204 0 8 0.584666
174 206 0 8 0.870859
174 207 0 8 0.843542
174 210 0 8 0.863345
174 211 0 8 0.687876
174 214 0 8 0.832238
174 222 0 8 0.755566
174 223 0 8 0.639247
174 224 0 8 0.782115
174 225 0 8 0.656536
174 226 0 8 0.701676
174 227 0 8 0.785874
174 228 0 8 0.567354
174 231 0 8 0.603865
174 234 0 8 0.556692
174 235 0 8 0.792977
174 238 0 8 0.757982
174 239 0 8 0.769273
174 242 0 8 0.767501
174 251 0 8 0.747382
174 252 0 8 0.726208
174 254 0 8 0.56143
174 255 0 8 0.881517
174 256 0 8 0.720701
174 259 0 8 0.644527
175 184 0 8 0.917201
175 185 0 8 0.960576
175 186 0 8 0.909453
175 187 0 8 0.67959
175 188 0 8 0.903742
175 189 0 8 0.956304
175 190 0 8 0.61557
175 192 0 8 0.910226
175 193 0 8 0.847404
175 196 0 8 0.81653
175 198 0 8 0.660578
175 202 0 8 0.711607
175 203 0 8 0.882895
175 204 0 8 0.681658
175 205 0 8 0.63664
175 206 0 8 0.932302
175 207 0 8 0.893583
175 210 0 8 0.905937
175 211 0 8 0.754769
175 214 0 8 0.88625
175 217 0 8 0.55052
175 222 0 8 0.837028
175 223 0 8 0.769645
175 224 0 8 0.872244
175 225 0 8 0.733015
175 226 0 8 0.776804
175 227 0 8 0.842298
175 228 0 8 0.664883
175 229 0 8 0.654145
175 231 0 8 0.739041
175 234 0 8 0.675534
175 235 0 8 0.845301
175 238 0 8 0.808684
175 239 0 8 0.814127
175 242 0 8 0.843046
175 248 0 8 0.56967
175 251 0 8 0.780545
175 252 0 8 0.779597
175 254 0 8 0.596723
175 255 0 8 0.905597
175 256 0 8 0.766294
175 259 0 8 0.720604
176 185 0 8 0.943014
176 186 0 8 0.862873
176 187 0 8 0.573005
176 188 0 8 0.855277
176 189 0 8 0.936483
176 190 0 8 0.541192
176 192 0 8 0.880356
176 193 0 8 0.791818
176 196 0 8 0.797345
176 198 0 8 0.604566
176 202 0 8 0.63223
176 203 0 8 0.815619
176 204 0 8 0.578806
176 206 0 8 0.880876
176 207 0 8 0.842854
176 210 0 8 0.858026
176 211 0 8 0.691731
176 214 0 8 0.849292
176 217 0 8 0.550798
176 222 0 8 0.769281
176 223 0 8 0.65568
176 224 0 8 0.813743
176 225 0 8 0.665969
176 226 0 8 0.714758
176 227 0 8 0.795634
176 228 0 8 0.541561
176 231 0 8 0.596437
176 234 0 8 0.568412
176 235 0 8 0.785896
176 238 0 8 0.737409
176 239 0 8 0.755332
176 242 0 8 0.801841
176 251 0 8 0.752553
176 252 0 8 0.705781
176 254 0 8 0.572676
176 255 0 8 0.882367
176 256 0 8 0.695053
176 259 0 8 0.661993
177 186 0 8 0.872257
177 187 0 8 0.594999
177 188 0 8 0.846488
177 189 0 8 0.939828
177 190 0 8 0.55526
177 192 0 8 0.86913
177 193 0 8 0.801722
177 196 0 8 0.728585
177 198 0 8 0.560879
177 202 0 8 0.641729
177 203 0 8 0.831761
177 204 0 8 0.620191
177 205 0 8 0.544069
177 206 0 8 0.889555
177 207 0 8 0.857114
177 210 0 8 0.862584
177 211 0 8 0.683036
177 214 0 8 0.845455
177 222 0 8 0.786099
177 223 0 8 0.673845
177 224 0 8 0.810156
177 225 0 8 0.677507
177 226 0 8 0.725263
177 227 0 8 0.806388
177 228 0 8 0.58547
177 229 0 8 0.540757
177 231 0 8 0.624831
177 234 0 8 0.583692
177 235 0 8 0.78777
177 238 0 8 0.752452
177 239 0 8 0.755321
177 242 0 8 0.776459
177 251 0 8 0.738336
177 252 0 8 0.707684
177 254 0 8 0.564678
177 255 0 8 0.878097
177 256 0 8 0.712217
177 259 0 8 0.657408
178 187 0 8 0.644974
178 188 0 8 0.879491
178 189 0 8 0.950476
178 190 0 8 0.596323
178 192 0 8 0.893908
178 193 0 8 0.816968
178 196 0 8 0.771497
178 198 0 8 0.604752
178 202 0 8 0.699327
178 203 0 8 0.863365
178 204 0 8 0.657981
178 205 0 8 0.577199
178 206 0 8 0.905841
178 207 0 8 0.865756
178 210 0 8 0.871694
178 211 0 8 0.703258
178 214 0 8 0.853017
178 217 0 8 0.554374
178 222 0 8 0.821547
178 223 0 8 0.721118
178 224 0 8 0.841887
178 225 0 8 0.715814
178 226 0 8 0.745499
178 227 0 8 0.822366
178 228 0 8 0.61698
178 229 0 8 0.582773
178 231 0 8 0.654186
178 234 0 8 0.599668
178 235 0 8 0.775764
178 238 0 8 0.748903
178 239 0 8 0.748557
178 242 0 8 0.788748
178 251 0 8 0.726275
178 252 0 8 0.702914
178 254 0 8 0.563468
178 255 0 8 0.870335
178 256 0 8 0.701013
178 259 0 8 0.660917
179 188 0 8 0.884201
179 189 0 8 0.94552
179 190 0 8 0.584132
179 192 0 8 0.889984
179 193 0 8 0.784181
179 196 0 8 0.781295
179 198 0 8 0.613621
179 202 0 8 0.740053
179 203 0 8 0.867299
179 204 0 8 0.679674
179 205 0 8 0.604285
179 206 0 8 0.904181
179 207 0 8 0.86063
179 210 0 8 0.862963
179 211 0 8 0.681766
179 214 0 8 0.82621
179 217 0 8 0.565921
179 222 0 8 0.851175
179 223 0 8 0.778531
179 224 0 8 0.881739
179 225 0 8 0.75974
179 226 0 8 0.796801
179 227 0 8 0.849301
179 228 0 8 0.676725
179 229 0 8 0.684292
179 231 0 8 0.746553
179 234 0 8 0.634799
179 235 0 8 0.780181
179 238 0 8 0.736381
179 239 0 8 0.73366
179 242 0 8 0.767915
179 248 0 8 0.551218
179 251 0 8 0.729732
179 252 0 8 0.703528
179 254 0 8 0.5606
179 255 0 8 0.86912
179 256 0 8 0.690554
179 259 0 8 0.638598
180 189 0 8 0.896447
180 192 0 8 0.824325
180 193 0 8 0.64288
180 196 0 8 0.681874
180 202 0 8 0.680849
180 203 0 8 0.803375
180 204 0 8 0.604184
180 205 0 8 0.541884
180 206 0 8 0.858784
180 207 0 8 0.807588
180 210 0 8 0.802922
180 211 0 8 0.605109
180 214 0 8 0.687926
180 222 0 8 0.80562
180 223 0 8 0.740956
180 224 0 8 0.85574
180 225 0 8 0.730378
180 226 0 8 0.767116
180 227 0 8 0.817403
180 228 0 8 0.623464
180 229 0 8 0.671485
180 231 0 8 0.749496
180 234 0 8 0.608606
180 235 0 8 0.731867
180 238 0 8 0.680496
180 239 0 8 0.663783
180 242 0 8 0.648562
180 251 0 8 0.673304
180 252 0 8 0.657671
180 255 0 8 0.822391
180 256 0 8 0.634544
180 259 0 8 0.552006
181 190 0 8 0.6082
181 192 0 8 0.870501
181 193 0 8 0.781495
181 196 0 8 0.734706
181 198 0 8 0.549541
181 202 0 8 0.672501
181 203 0 8 0.813729
181 204 0 8 0.641479
181 205 0 8 0.566168
181 206 0 8 0.879623
181 207 0 8 0.848531
181 210 0 8 0.859822
181 211 0 8 0.694479
181 214 0 8 0.801425
181 222 0 8 0.792035
181 223 0 8 0.685716
181 224 0 8 0.824991
181 225 0 8 0.69388
181 226 0 8 0.735271
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181 228 0 8 0.606407
181 229 0 8 0.583347
181 231 0 8 0.673977
181 234 0 8 0.622462
181 235 0 8 0.77628
181 238 0 8 0.748836
181 239 0 8 0.741579
181 242 0 8 0.723672
181 251 0 8 0.743239
181 252 0 8 0.712355
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181 255 0 8 0.874278
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END