T0392.best_hits

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1g9oA	91	3.7867e-10	1pdr	b.36.1.1
1be9A	119	5.3273e-10	1pdr	b.36.1.1
1tp5A	119	6.4443e-10		b.36.1.1
1i92A	91	1.5624e-09	1pdr	b.36.1.1
2he2A	102	1.8259e-09
2ozfA	92	2.0457e-09
1q3oA	109	2.9601e-09		b.36.1.1
2f5yA	91	3.1868e-09		b.36.1.1
2pktA	91	4.6906e-09
2he4A	90	4.9844e-09
1n7eA	97	7.0578e-09		b.36.1.1
2jilA	97	7.4185e-09
2q3gA	89	8.1272e-09
2ocsA	88	8.6686e-09
1wf7A	103	9.0451e-09		b.36.1.1
2egoA	96	1.2166e-08
1fc6A	388	1.5095e-08	1fc6A	b.36.1.3
				c.14.1.2
2jikA	101	1.6229e-08
1qavA	90	1.6428e-08	1qauA	b.36.1.1
2uzcA	88	1.8024e-08
2fe5A	94	2.9608e-08		b.36.1.1
1pdr	97	3.2113e-08	1pdr
1m5zA	91	3.7727e-08		b.36.1.1
2fcfA	103	3.9356e-08		b.36.1.1
1vaeA	111	4.1519e-08		b.36.1.1
2opgA	98	4.8333e-08
2omjA	89	6.2823e-08
1mfgA	95	7.0121e-08		b.36.1.1
2pa1A	87	7.0546e-08
2fneA	117	7.4133e-08		b.36.1.1
2vphA	100	8.4029e-08
2awxA	105	1.0724e-07
1um7A	113	1.0878e-07		b.36.1.1
1ihjA	98	1.1158e-07	1pdr	b.36.1.1
2h3lA	103	1.3178e-07		b.36.1.1
1gq5A	91	1.3340e-07		b.36.1.1
1gq4A	90	1.4643e-07		b.36.1.1
2r4hA	112	1.4835e-07
2i1nA	102	1.5424e-07
2dlsA	93	1.6586e-07
1r6jA	82	1.9021e-07		b.36.1.1
2dkrA	93	2.0886e-07
1wi2A	104	2.1844e-07		b.36.1.1
1v5lA	103	2.4302e-07		b.36.1.1
1nf3C	128	2.6531e-07		b.36.1.1
2qg1A	92	3.1918e-07
1pdrA	99	3.4901e-07		b.36.1.1
2iwqA	123	3.6041e-07
1qavB	115	3.6662e-07	1qauA	b.36.1.1
2iwoA	120	4.5389e-07
1uf1A	128	4.7109e-07		b.36.1.1
1uezA	101	4.9026e-07		b.36.1.1
2d90A	102	4.9656e-07
2i0iA	85	6.0027e-07		b.36.1.1
1x5qA	110	6.2480e-07		b.36.1.1
1whdA	100	6.3225e-07		b.36.1.1
1wfvA	103	6.3965e-07		b.36.1.1
1b8qA	127	6.5298e-07	1qauA	b.36.1.1
2q9vA	90	6.8227e-07
2dm8A	116	6.9567e-07
1qauA	112	7.1432e-07	1qauA	b.36.1.1
1kwaA	88	7.4070e-07	1kwaA	b.36.1.1
2dc2A	103	7.4610e-07
2iwnA	97	7.8673e-07
2bygA	117	8.1790e-07		b.36.1.1
2enoA	120	9.7094e-07
2i04A	85	1.0207e-06
1w9eA	166	1.0817e-06		b.36.1.1
				b.36.1.1
2dluA	111	1.1938e-06
2v90A	96	1.2194e-06
2jinA	102	1.2433e-06
2edzA	114	1.2526e-06
1l6oA	95	1.2945e-06		b.36.1.1
1rgrA	99	1.3888e-06		b.36.1.1
1whaA	105	1.4187e-06		b.36.1.1
1kefA	93	1.4727e-06		b.36.1.1
1iu0A	91	1.5661e-06		b.36.1.1
2h2bA	107	1.5756e-06
2eaqA	90	1.7246e-06
2vrfA	95	1.8105e-06
1zokA	93	1.9080e-06		b.36.1.1
2gzvA	114	2.0164e-06
2eeiA	106	2.0856e-06
2eejA	96	2.4201e-06
1uewA	114	4.1301e-06		b.36.1.1
1vj6A	102	4.2169e-06		b.36.1.1
1d5gA	96	4.2813e-06		b.36.1.1
1z87A	263	4.3665e-06
1uhpA	107	4.4998e-06		b.36.1.1
1z86A	87	4.7470e-06		b.36.1.1
2pdzA	86	4.8010e-06	1pdr	b.36.1.1
2v1wA	90	5.6226e-06
1gm1A	94	5.7833e-06		b.36.1.1
2eegA	94	5.9721e-06
2oqsA	97	6.0864e-06
1ujuA	111	6.3352e-06		b.36.1.1
2f0aA	98	6.3480e-06		b.36.1.1
2djtA	104	6.5389e-06

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1x5rA	112	6.7962e-06		b.36.1.1
2yuyA	126	6.8809e-06
1rgwA	85	6.8921e-06		b.36.1.1
2g2lA	105	6.9482e-06
1wjlA	90	6.9594e-06		b.36.1.1
1x5nA	114	7.0931e-06		b.36.1.1
1ueqA	123	7.3186e-06		b.36.1.1
1uitA	117	7.3622e-06		b.36.1.1
2awwA	105	7.4652e-06
3bpuA	88	7.5333e-06
2awuA	105	7.6745e-06
1x6dA	119	7.8441e-06		b.36.1.2
2ogpA	97	8.1470e-06
2eehA	100	9.6330e-06
1vb7A	94	1.0149e-05		b.36.1.1
1um1A	110	1.2602e-05		b.36.1.1
2egkA	101	1.3178e-05
2i0lA	84	1.3621e-05
2rczA	81	1.3749e-05
2ehrA	117	1.3900e-05
1q7xA	108	1.4988e-05		b.36.1.1
1x45A	98	1.5099e-05		b.36.1.1
2pntA	98	1.5216e-05
1v5qA	122	1.5517e-05		b.36.1.1
1qlcA	95	1.5555e-05	1qauA	b.36.1.1
1p1eA	101	1.6148e-05		b.36.1.1
2reyA	100	1.6324e-05
2o2tA	117	1.8490e-05
2dazA	124	2.0300e-05
3b76A	118	2.1844e-05
1wf8A	107	2.2782e-05		b.36.1.1
1p1dA	196	2.4453e-05		b.36.1.1
				b.36.1.1
2dmzA	129	2.5076e-05
2fn5A	94	2.7100e-05
1oziA	99	2.9324e-05		b.36.1.1
1ry4A	128	3.0082e-05		b.36.1.1
1x8sA	102	4.1794e-05		b.36.1.1
2cs5A	119	4.4270e-05		b.36.1.1
1rzxA	98	4.4712e-05		b.36.1.1
2g5mB	113	4.8603e-05
1xz9A	101	4.9026e-05		b.36.1.1
1t2mA	101	5.3763e-05		b.36.1.1
2ainA	93	5.4365e-05
1uepA	103	7.8158e-05		b.36.1.1
1obxA	79	9.4682e-05		b.36.1.1
1wh1A	124	1.0617e-04		b.36.1.1
1va8A	113	1.0760e-04		b.36.1.1
2d92A	108	1.1992e-04
2cssA	121	1.3750e-04		b.36.1.1
2csjA	117	1.3800e-04		b.36.1.1
2pkuA	87	1.4372e-04
2qbwA	195	1.4446e-04
1wi4A	109	1.5306e-04		b.36.1.1
2jweA	88	1.6956e-04
2db5A	128	1.6990e-04
1ujdA	117	1.7103e-04		b.36.1.1
1fc9A	388	1.8758e-04	1fc6A	c.14.1.2
				b.36.1.3
1ufxA	103	1.8865e-04		b.36.1.1
1zubA	114	1.8865e-04		b.36.1.1
1y7nA	90	2.0548e-04		b.36.1.1
1i16A	130	2.1866e-04		b.36.1.2
1wg6A	127	2.2264e-04		b.36.1.1
1u3bA	185	2.2363e-04		b.36.1.1
				b.36.1.1
2edvA	96	2.3048e-04
1u39A	80	2.3243e-04		b.36.1.1
1ujvA	96	2.8215e-04		b.36.1.1
2edpA	100	3.6200e-04
2yt8A	94	3.6895e-04
2osgA	83	3.7202e-04
1v62A	117	4.2384e-04		b.36.1.1
2qkvA	96	4.4754e-04
2ev8A	97	5.1127e-04
1wfgA	131	6.4345e-04		b.36.1.1
1mc7A	95	7.0431e-04		b.36.1.1
2ejyA	97	7.5514e-04
2h2cA	107	8.5557e-04
2h3mA	97	8.9055e-04
1v6bA	118	1.1012e-03		b.36.1.1
2joaA	105	1.4758e-03
2ytwA	118	1.4911e-03
1lcyA	325	1.6222e-03		b.47.1.1
				b.36.1.4
2p3wA	112	1.6449e-03
1u37A	89	2.1749e-03		b.36.1.1
1wifA	126	3.0163e-03		b.36.1.1
2pzdA	113	3.4071e-03
1te0A	318	1.5154e-02		b.47.1.1
				b.36.1.4

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.