Best Alignments for T0391

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1uliA	2.0948e-22	1uliA/T0391-1uliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2gbwA	1.2028e-21	2gbwA/T0391-2gbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bmoA	1.2152e-21	2bmoA/T0391-2bmoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1z02A	1.4800e-21	1z02A/T0391-1z02A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ckfA	2.3448e-21	2ckfA/T0391-2ckfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b1xA	3.1463e-21	2b1xA/T0391-2b1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2de6A	5.5181e-21	2de6A/T0391-2de6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1o7nA	2.0449e-20	1o7nA/T0391-1o7nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2e4qA	7.2562e-17	2e4qA/T0391-2e4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i7fA	1.0229e-16	2i7fA/T0391-2i7fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fqtA	1.6063e-16	1fqtA/T0391-1fqtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2de6D	7.0339e-16	2de6D/T0391-2de6D-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rfsA	1.0121e-15	1rfsA/T0391-1rfsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
1nykA	1.1940e-15	1nykA/T0391-1nykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2q3wA	1.2556e-15	2q3wA/T0391-2q3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
1vm9A	1.7590e-15	1vm9A/T0391-1vm9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
1rfs	3.3412e-15	1rfs/T0391-1rfs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g8kB	3.4443e-15	1g8kB/T0391-1g8kB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2e74D	1.1480e-14	2e74D/T0391-2e74D-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1 f.23.12.1
3c0dA	1.1703e-14	3c0dA/T0391-3c0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001