Best Alignments for T0391

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1uliA	3.0303e-20	1uliA/T0391-1uliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1z02A	3.1062e-19	1z02A/T0391-1z02A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ckfA	1.1961e-18	2ckfA/T0391-2ckfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bmoA	3.3076e-18	2bmoA/T0391-2bmoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2gbwA	3.8435e-18	2gbwA/T0391-2gbwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2de6A	6.3770e-18	2de6A/T0391-2de6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1o7nA	3.9035e-17	1o7nA/T0391-1o7nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2b1xA	3.9685e-17	2b1xA/T0391-2b1xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1eg9A	1.3741e-16	1eg9A/T0391-1eg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1ndoA	2.2316e-16	1ndoA/T0391-1ndoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1fqtA	1.1834e-15	1fqtA/T0391-1fqtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2e4qA	1.3843e-14	2e4qA/T0391-2e4qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vm9A	3.6127e-14	1vm9A/T0391-1vm9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
1sjgA	4.8909e-14	1sjgA/T0391-1sjgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2q3wA	2.8810e-13	2q3wA/T0391-2q3wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2de6D	3.1228e-13	2de6D/T0391-2de6D-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c0dA	4.1495e-13	3c0dA/T0391-3c0dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i7fA	5.8749e-13	2i7fA/T0391-2i7fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jo6A	1.5108e-12	2jo6A/T0391-2jo6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nykA	2.7771e-11	1nykA/T0391-1nykA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001