Best Alignments for T0391

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2gbwA	1.4160e-24	2gbwA/T0391-2gbwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uliA	2.8033e-24	1uliA/T0391-1uliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2de6A	9.0852e-24	2de6A/T0391-2de6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2bmoA	1.3457e-23	2bmoA/T0391-2bmoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2b1xA	2.3006e-23	2b1xA/T0391-2b1xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2ckfA	4.1693e-23	2ckfA/T0391-2ckfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z02A	7.8651e-23	1z02A/T0391-1z02A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o7nA	8.6109e-22	1o7nA/T0391-1o7nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
1eg9A	1.5851e-21	1eg9A/T0391-1eg9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.2 d.129.3.3
2e4qA	3.1927e-18	2e4qA/T0391-2e4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i7fA	9.1810e-18	2i7fA/T0391-2i7fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c0dA	1.2642e-17	3c0dA/T0391-3c0dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fqtA	4.4878e-17	1fqtA/T0391-1fqtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2e74D	7.4360e-17	2e74D/T0391-2e74D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1 f.23.12.1
1nykA	9.1902e-17	1nykA/T0391-1nykA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
2q3wA	9.9120e-17	2q3wA/T0391-2q3wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
1rfs	1.2117e-16	1rfs/T0391-1rfs-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2de6D	1.6043e-16	2de6D/T0391-2de6D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vm9A	2.3564e-16	1vm9A/T0391-1vm9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1
1rfsA	3.9700e-16	1rfsA/T0391-1rfsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.33.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001