Best Alignments for T0389

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1uarA/T0389-1uarA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uarA/T0389-1uarA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8764e-187.39e-68 c.46.1.2
c.46.1.2
1hzmA/T0389-1hzmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hzmA/T0389-1hzmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8200e-152.99e-30 c.46.1.1
2a2kA/T0389-2a2kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2kA/T0389-2a2kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0569e-141.53e-55
2oucA/T0389-2oucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2oucA/T0389-2oucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0405e-134.63e-56
2hhgA/T0389-2hhgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hhgA/T0389-2hhgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2921e-125.54e-58
2j6pA/T0389-2j6pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2j6pA/T0389-2j6pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1627e-123.79e-51
2eg4A/T0389-2eg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2eg4A/T0389-2eg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5890e-112.75e-44
2ifdA/T0389-2ifdA-t04-global-adpstyle1.a2m 2ifdA/T0389-2ifdA-t04-global-adpstyle1.al 1.1039e-082.58e-32
2ifvA/T0389-2ifvA-t04-global-adpstyle1.a2m 2ifvA/T0389-2ifvA-t04-global-adpstyle1.al 1.8145e-081.56e-31
2fsxA/T0389-2fsxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fsxA/T0389-2fsxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9237e-084.33e-35

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001