Best Alignments for T0389

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2oucA	3.7463e-17	2oucA/T0389-2oucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t3kA	3.4270e-16	1t3kA/T0389-1t3kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1qb0A	3.8792e-16	1qb0A/T0389-1qb0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1gmxA	6.8855e-16	1gmxA/T0389-1gmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.3
2j6pA	1.2125e-15	2j6pA/T0389-2j6pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yt8A	1.4025e-15	1yt8A/T0389-1yt8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
2a2kA	1.8141e-15	2a2kA/T0389-2a2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1whbA	1.9298e-15	1whbA/T0389-1whbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1rhsA	2.7644e-15	1rhsA/T0389-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1e0cA	3.2016e-15	1e0cA/T0389-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
2hhgA	3.2262e-15	2hhgA/T0389-2hhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ymkA	5.4948e-15	1ymkA/T0389-1ymkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1rhs	9.9964e-15	1rhs/T0389-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fsxA	1.8542e-14	2fsxA/T0389-2fsxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uarA	2.7772e-14	1uarA/T0389-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
2gwfA	4.3915e-14	2gwfA/T0389-2gwfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1okgA	2.1107e-13	1okgA/T0389-1okgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 d.26.1.3
2eg4A	4.3960e-11	2eg4A/T0389-2eg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wv9A	5.7098e-10	1wv9A/T0389-1wv9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1c25	2.3296e-08	1c25/T0389-1c25-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001