Best Alignments for T0389

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2oucA	8.4659e-17	2oucA/T0389-2oucA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hzmA	3.0777e-15	1hzmA/T0389-1hzmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2a2kA	4.9247e-15	2a2kA/T0389-2a2kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ymkA	1.3584e-14	1ymkA/T0389-1ymkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1t3kA	1.0079e-13	1t3kA/T0389-1t3kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1qb0A	1.8555e-13	1qb0A/T0389-1qb0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1c25	3.2554e-13	1c25/T0389-1c25-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gmxA	4.1123e-12	1gmxA/T0389-1gmxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.3
1yt8A	1.1839e-11	1yt8A/T0389-1yt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
2fsxA	4.5955e-11	2fsxA/T0389-2fsxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j6pA	5.3958e-11	2j6pA/T0389-2j6pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hhgA	1.0575e-10	2hhgA/T0389-2hhgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eg4A	1.7146e-10	2eg4A/T0389-2eg4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gwfA	1.7203e-10	2gwfA/T0389-2gwfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1rhsA	1.8936e-10	1rhsA/T0389-1rhsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1e0cA	3.7533e-10	1e0cA/T0389-1e0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1whbA	9.7364e-10	1whbA/T0389-1whbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1rhs	4.4779e-09	1rhs/T0389-1rhs-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uarA	8.2259e-09	1uarA/T0389-1uarA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1wv9A	1.6003e-08	1wv9A/T0389-1wv9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001