# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1hzmA	154	1.54e-14	c.46.1.1	65975
2oucA	142	5.03e-14		
2a2kA	175	6.99e-14		
1ymkA	175	7.45e-13	c.46.1.1	123699
1c25	161	8.55e-13		
1qb0A	211	9.65e-13	c.46.1.1	32699
1t3kA	152	1.13e-11	c.46.1.1	106357
1yt8A	539	4.06e-11	c.46.1.2,c.46.1.2,c.46.1.2,c.46.1.2	123996,123997,123998,123999
1gmxA	108	4.97e-11	c.46.1.3	65355
2j6pA	152	2.18e-10		
2hhgA	139	2.33e-10		
1e0cA	271	2.90e-10	c.46.1.2,c.46.1.2	32717,32718
2fsxA	148	3.09e-10		
1rhsA	296	2.21e-09	c.46.1.2,c.46.1.2	32703,32704
2gwfA	157	2.26e-09	c.46.1.4	135802
2eg4A	230	7.61e-09		
1rhs	296	1.11e-08		
1uarA	285	1.32e-08	c.46.1.2,c.46.1.2	107762,107763
1whbA	157	1.92e-07	c.46.1.4	114639
1wv9A	94	4.72e-07		
1okgA	373	7.56e-07	c.46.1.2,c.46.1.2,d.26.1.3	93250,93251,93252
1y2qA	143	13.59		
1ns5A	155	20.35	c.116.1.3	80705
1rxwA	336	20.76	a.60.7.1,c.120.1.2	98059,98060
2ooqA	286	22.71		
1jztA	246	23.83	c.104.1.1	63319
1xel	338	26.01		
1gxmA	332	26.26	a.102.5.1	76371
2rdmA	132	27.58		
1l6oA	95	27.78	b.36.1.1	84534
2f71A	298	28.85	c.45.1.2	133070
3b55A	451	29.17		
2fcaA	213	30.35	c.66.1.53	133262
1g7fA	298	33.69	c.45.1.2	60330
1d5rA	324	34.41	b.7.1.1,c.45.1.1	23181,32697
2fh7A	595	36.77		
2ggsA	273	39.28		
1zckA	154	40.69		
1pydA	556	40.87	c.31.1.3,c.36.1.5,c.36.1.9	31735,31773,31774
1g5rA	196	41.02	c.37.1.11	32367
2hl0A	143	41.17		
2pidA	356	44.13		
2qtwA	124	44.14		
1rxdA	159	46.34	c.45.1.1	111959
2yv1A	294	46.89		
1rpmA	278	48.08	c.45.1.2	32679
1x24A	180	48.50		
1udcA	338	49.82	c.2.1.2	29785
1rtqA	299	50.17	c.56.5.4	97819
2ob9A	130	52.73		
2bijA	305	53.87		
2pa5A	314	53.93		
2pbnA	313	56.69		
3brsA	289	58.84		
2gasA	307	63.74		
2qgmA	445	64.30		
2elcA	329	64.87		
2i75A	320	67.40		
1ptvA	321	68.04	c.45.1.2	32665
1pa1A	310	68.29	c.45.1.2	94404
1vhhA	162	71.26	d.65.1.2	39550
1qj5A	429	71.34	c.67.1.4	34493
1nni1	174	72.09		
1vkrA	125	74.32	c.44.2.1	108689
1lokA	291	75.30	c.56.5.4	78122
2h4vA	320	75.60		
1p15A	253	78.74	c.45.1.2	93894
1oc7A	364	79.32	c.6.1.1	86794
1c3pA	375	80.60	c.42.1.2	32606
2b49A	287	81.74		
1vjgA	218	82.78	c.23.10.6	100810
1yfoA	302	83.28	c.45.1.2	32681
1ml8A	134	83.61	d.227.1.2	85013
1g8fA	511	83.75	b.122.1.3,c.26.1.5,c.37.1.15	60348,60349,60350
1ywfA	296	86.61	c.45.1.5	124144
2b4pA	334	87.20