Best Alignments for T0389

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1whbA	4.7193e-17	1whbA/T0389-1whbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1t3kA	5.1179e-17	1t3kA/T0389-1t3kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2j6pA	1.0268e-16	2j6pA/T0389-2j6pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oucA	1.5243e-16	2oucA/T0389-2oucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e0cA	1.6463e-16	1e0cA/T0389-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1rhs	1.6887e-16	1rhs/T0389-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qb0A	1.7109e-16	1qb0A/T0389-1qb0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1gmxA	1.9288e-16	1gmxA/T0389-1gmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.3
1yt8A	1.9655e-16	1yt8A/T0389-1yt8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
2hhgA	1.0466e-15	2hhgA/T0389-2hhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fsxA	4.3008e-15	2fsxA/T0389-2fsxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a2kA	5.9671e-15	2a2kA/T0389-2a2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhsA	7.0126e-15	1rhsA/T0389-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1ymkA	1.0315e-14	1ymkA/T0389-1ymkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2gwfA	1.7222e-14	2gwfA/T0389-2gwfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1uarA	2.5675e-14	1uarA/T0389-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1okgA	1.9010e-13	1okgA/T0389-1okgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 d.26.1.3
2eg4A	3.2400e-11	2eg4A/T0389-2eg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wv9A	2.0153e-10	1wv9A/T0389-1wv9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f46A	2.8537e+00	2f46A/T0389-2f46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001